Variant report

Variant	rs17570917
Chromosome Location	chr6:37170422-37170423
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:37142590..37145563-chr6:37170274..37176000,5	K562	blood:
2	chr6:36993719..36995482-chr6:37168035..37170817,2	K562	blood:
3	chr6:37137974..37142365-chr6:37169170..37171597,4	K562	blood:
4	chr6:37159957..37163284-chr6:37166694..37170488,3	K562	blood:
5	chr6:37169595..37171540-chr6:37173349..37175303,2	K562	blood:
6	chr6:37159019..37162838-chr6:37167718..37170821,3	K562	blood:

Variant related genes	Relation type
ENSG00000137193	Chromatin interaction

rs_ID	r²[population]
rs16889520	0.90[JPT][hapmap]
rs9462284	1.00[YRI][hapmap]
rs9470513	0.81[AFR][1000 genomes]
rs9470535	0.80[YRI][hapmap]

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37167200-37179200	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr6:37167400-37173400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr6:37167600-37173600	Enhancers	Fetal Intestine Small	intestine
4	chr6:37168000-37173800	Enhancers	HepG2	liver
5	chr6:37168600-37171800	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr6:37168800-37171400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr6:37169000-37171600	Enhancers	Primary T cells fromperipheralblood	blood
8	chr6:37169200-37171600	Enhancers	Primary T helper naive cells from peripheral blood	blood
9	chr6:37169200-37172600	Enhancers	Primary T helper cells fromperipheralblood	blood
10	chr6:37169200-37174000	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr6:37169400-37171800	Enhancers	K562	blood
12	chr6:37169400-37173200	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr6:37169400-37173400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr6:37169400-37173400	Enhancers	Duodenum Mucosa	Duodenum
15	chr6:37169400-37174200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
16	chr6:37169400-37174200	Enhancers	Primary T helper cells PMA-I stimulated	--
17	chr6:37169600-37170600	Enhancers	Sigmoid Colon	Sigmoid Colon
18	chr6:37169600-37171000	Enhancers	Rectal Mucosa Donor 29	rectum
19	chr6:37169600-37171200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
20	chr6:37169600-37171400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
21	chr6:37169600-37171600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
22	chr6:37169600-37171800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
23	chr6:37169600-37172200	Enhancers	Primary T cells from cord blood	blood
24	chr6:37169600-37176200	Enhancers	Primary hematopoietic stem cells	blood
25	chr6:37169800-37171000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr6:37169800-37173800	Enhancers	Fetal Intestine Large	intestine
27	chr6:37170000-37171400	Weak transcription	Fetal Thymus	thymus
28	chr6:37170000-37172400	Enhancers	Stomach Mucosa	stomach
29	chr6:37170000-37173000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr6:37170000-37178000	Weak transcription	HUES6 Cell Line	embryonic stem cell
31	chr6:37170200-37172800	Enhancers	Dnd41	blood
32	chr6:37170400-37171000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr6:37170400-37171000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
34	chr6:37170400-37171000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr6:37170400-37171000	Enhancers	NHEK	skin
36	chr6:37170400-37171200	Weak transcription	Colonic Mucosa	Colon
37	chr6:37170400-37171200	Bivalent Enhancer	HUVEC	blood vessel
38	chr6:37170400-37171400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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