Variant report

Variant	rs17624404
Chromosome Location	chr14:84594097-84594098
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11627572	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11628862	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12895378	0.84[ASN][1000 genomes]
rs17697962	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1971243	0.88[ASN][1000 genomes]
rs4369583	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4551972	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55912304	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs67901677	0.84[ASN][1000 genomes]
rs72701082	0.84[EUR][1000 genomes]
rs72701083	0.84[EUR][1000 genomes]
rs72701092	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72703208	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72703211	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7494031	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84592400-84595200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:84593000-84596800	Enhancers	Hela-S3	cervix
3	chr14:84594000-84596800	Enhancers	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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