The 2.0 version of rSNPBase

Variant report

Variant rs17629043
Chromosome Location chr6:143480578-143480579
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143443800-143498800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:143444600-143516400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:143448400-143487400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr6:143452000-143497000 Weak transcription Fetal Stomach stomach
5 chr6:143453000-143481600 Weak transcription Right Ventricle heart
6 chr6:143453000-143497200 Weak transcription Pancreas Pancrea
7 chr6:143453000-143508600 Weak transcription Fetal Lung lung
8 chr6:143453000-143510600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr6:143458200-143486600 Weak transcription Aorta Aorta
10 chr6:143458800-143529200 Weak transcription Primary T cells from cord blood blood
11 chr6:143459200-143484200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:143459600-143484000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr6:143459600-143486600 Weak transcription Duodenum Mucosa Duodenum
14 chr6:143459600-143505400 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr6:143461000-143487400 Weak transcription Brain Cingulate Gyrus brain
16 chr6:143462200-143497800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr6:143463000-143508400 Weak transcription Stomach Smooth Muscle stomach
18 chr6:143465800-143483600 Weak transcription H9 Cell Line embryonic stem cell
19 chr6:143468400-143484600 Weak transcription Primary hematopoietic stem cells blood
20 chr6:143469800-143483600 Weak transcription Fetal Intestine Large intestine
21 chr6:143470200-143485800 Weak transcription HepG2 liver
22 chr6:143471800-143486600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr6:143476400-143482000 Enhancers Psoas Muscle Psoas
24 chr6:143477000-143482200 Enhancers Skeletal Muscle Male skeletal muscle
25 chr6:143477000-143501200 Weak transcription Right Atrium heart
26 chr6:143477800-143481600 Enhancers NHEK skin
27 chr6:143477800-143481800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:143477800-143481800 Enhancers HMEC breast
29 chr6:143477800-143482200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:143478200-143483800 Weak transcription Fetal Intestine Small intestine
31 chr6:143478400-143482200 Enhancers Osteobl bone
32 chr6:143478600-143480800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:143478800-143480800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr6:143478800-143482600 Enhancers NHDF-Ad bronchial
35 chr6:143479000-143480600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr6:143479000-143480600 Enhancers NHLF lung
37 chr6:143479200-143481000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr6:143479200-143481000 Enhancers Left Ventricle heart
39 chr6:143479200-143482200 Enhancers Skeletal Muscle Female skeletal muscle
40 chr6:143479200-143488400 Weak transcription HSMM muscle
41 chr6:143479400-143481200 Enhancers Fetal Muscle Leg muscle
42 chr6:143479400-143482200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr6:143479600-143485000 Weak transcription Ovary ovary
44 chr6:143479600-143496000 Weak transcription Brain Hippocampus Middle brain
45 chr6:143479600-143497200 Weak transcription Esophagus oesophagus
46 chr6:143479600-143499400 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr6:143479600-143508600 Weak transcription Colon Smooth Muscle Colon
48 chr6:143479600-143534600 Weak transcription Gastric stomach
49 chr6:143479800-143481800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr6:143479800-143482200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015