Variant report
Variant | rs17642955 |
---|---|
Chromosome Location | chr10:37217401-37217402 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
No data |
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Variant related genes | Relation type |
---|---|
ENSG00000163867 | Chromatin interaction |
ENSG00000271741 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs11010978 | 1.00[AFR][1000 genomes] |
rs11010980 | 1.00[AFR][1000 genomes] |
rs12761676 | 1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs12769604 | 1.00[AFR][1000 genomes] |
rs12774816 | 0.91[ASN][1000 genomes] |
rs12785183 | 1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1036571 | chr10:37172804-37396508 | Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv1052867 | chr10:37196806-37323802 | Weak transcription Enhancers Active TSS ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
3 | nsv1046197 | chr10:37200503-37333823 | Enhancers Weak transcription Active TSS ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |