Variant report

Variant	rs17658754
Chromosome Location	chr19:51558857-51558858
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10403436	0.87[ASN][1000 genomes]
rs10411442	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10416060	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10418724	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2691240	0.81[ASN][1000 genomes]
rs2691243	0.86[CHB][hapmap]
rs2736436	0.86[CHB][hapmap]
rs8110488	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8111207	1.00[CEU][hapmap];0.84[CHB][hapmap];0.85[YRI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8111658	1.00[CEU][hapmap];0.84[CHB][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:51555800-51567800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:51556000-51559600	Weak transcription	Esophagus	oesophagus

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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