The 2.0 version of rSNPBase

Variant report

Variant rs17700190
Chromosome Location chr7:38764732-38764733
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38749000-38803600 Weak transcription Fetal Brain Male brain
2 chr7:38755000-38791200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr7:38755800-38771600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr7:38756800-38764800 Weak transcription Rectal Smooth Muscle rectum
5 chr7:38757000-38784200 Weak transcription HMEC breast
6 chr7:38757200-38835400 Weak transcription Psoas Muscle Psoas
7 chr7:38758600-38764800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr7:38758600-38767000 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr7:38758600-38767800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr7:38758600-38780600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr7:38758800-38764800 Weak transcription H9 Cell Line embryonic stem cell
12 chr7:38758800-38765200 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr7:38758800-38766400 Weak transcription Brain Germinal Matrix brain
14 chr7:38758800-38780000 Weak transcription Brain Substantia Nigra brain
15 chr7:38759000-38770600 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr7:38759200-38764800 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr7:38759200-38810200 Weak transcription A549 lung
18 chr7:38759400-38810600 Weak transcription Placenta Amnion Placenta Amnion
19 chr7:38759600-38764800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr7:38759600-38779600 Weak transcription Thymus Thymus
21 chr7:38759600-38784200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr7:38759800-38765000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr7:38759800-38765000 Weak transcription Fetal Lung lung
24 chr7:38759800-38768000 Weak transcription Muscle Satellite Cultured Cells --
25 chr7:38759800-38780600 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr7:38760000-38773000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr7:38760000-38799800 Weak transcription HUVEC blood vessel
28 chr7:38760400-38765200 Weak transcription Colon Smooth Muscle Colon
29 chr7:38760600-38769800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr7:38760600-38770000 Strong transcription Primary monocytes fromperipheralblood blood
31 chr7:38760600-38800200 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr7:38760800-38769800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
33 chr7:38761000-38820400 Weak transcription Stomach Mucosa stomach
34 chr7:38761200-38785400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr7:38761600-38764800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr7:38761600-38766400 Weak transcription GM12878-XiMat blood
37 chr7:38762200-38764800 Weak transcription Primary B cells from peripheral blood blood
38 chr7:38762600-38793200 Weak transcription Hela-S3 cervix
39 chr7:38763000-38764800 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr7:38763000-38767000 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr7:38763200-38764800 Weak transcription Fetal Thymus thymus
42 chr7:38763200-38764800 Weak transcription HSMM muscle
43 chr7:38763200-38765000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr7:38763200-38828000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr7:38763400-38769800 Strong transcription Adipose Nuclei Adipose
46 chr7:38763400-38780400 Weak transcription Fetal Kidney kidney
47 chr7:38763400-38792600 Weak transcription Small Intestine intestine
48 chr7:38763400-38828800 Weak transcription HepG2 liver
49 chr7:38763600-38767200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr7:38763600-38772000 Strong transcription Liver Liver

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Last update: Aug 31, 2015