Variant report

Variant rs1771318
Chromosome Location chr1:225696144-225696145
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225663200-225696400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:225666000-225696800 Weak transcription Esophagus oesophagus
3 chr1:225669800-225696800 Weak transcription Pancreas Pancrea
4 chr1:225672200-225696800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:225672200-225696800 Weak transcription Brain Germinal Matrix brain
6 chr1:225674400-225696800 Weak transcription Aorta Aorta
7 chr1:225676200-225696400 Weak transcription Gastric stomach
8 chr1:225677200-225696400 Weak transcription Brain Angular Gyrus brain
9 chr1:225677200-225696400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:225677200-225696400 Weak transcription Brain Substantia Nigra brain
11 chr1:225677200-225696400 Weak transcription Colon Smooth Muscle Colon
12 chr1:225677200-225696600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:225677200-225696600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:225677200-225696600 Weak transcription Psoas Muscle Psoas
15 chr1:225677200-225703600 Weak transcription Fetal Brain Female brain
16 chr1:225680200-225696200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:225680800-225696200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:225681200-225696200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr1:225681800-225699800 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:225683000-225696800 Weak transcription Lung lung
21 chr1:225683400-225696600 Weak transcription Right Ventricle heart
22 chr1:225684200-225696800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:225686800-225696200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:225686800-225696400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:225686800-225696400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:225686800-225696400 Weak transcription Stomach Smooth Muscle stomach
27 chr1:225686800-225699800 Weak transcription Adipose Nuclei Adipose
28 chr1:225687000-225696600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:225687000-225705000 Weak transcription Spleen Spleen
30 chr1:225687400-225704400 Weak transcription Fetal Stomach stomach
31 chr1:225688000-225696600 Weak transcription Brain Cingulate Gyrus brain
32 chr1:225688600-225704600 Weak transcription Placenta Placenta
33 chr1:225688800-225696400 Weak transcription Brain Hippocampus Middle brain
34 chr1:225688800-225696400 Weak transcription Fetal Intestine Large intestine
35 chr1:225688800-225696400 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:225688800-225696600 Weak transcription Fetal Intestine Small intestine
37 chr1:225688800-225711400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr1:225689200-225696600 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:225689200-225696600 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr1:225689200-225696600 Weak transcription Fetal Muscle Trunk muscle
41 chr1:225689200-225696600 Weak transcription Ovary ovary
42 chr1:225689200-225696600 Weak transcription HSMMtube muscle
43 chr1:225689200-225721000 Weak transcription Duodenum Mucosa Duodenum
44 chr1:225689800-225696400 Weak transcription H9 Cell Line embryonic stem cell
45 chr1:225691000-225696600 Weak transcription Right Atrium heart
46 chr1:225691000-225706200 Weak transcription Primary B cells from cord blood blood
47 chr1:225691200-225705000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:225692400-225696200 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr1:225692600-225704800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:225693200-225702800 Weak transcription Pancreatic Islets Pancreatic Islet

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