Variant report

Variant rs7545317
Chromosome Location chr1:225725441-225725442
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225700000-225726400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:225700000-225726400 Weak transcription HMEC breast
3 chr1:225701400-225727200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:225701400-225744400 Weak transcription HUVEC blood vessel
5 chr1:225701400-225747000 Weak transcription Hela-S3 cervix
6 chr1:225705600-225747400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:225705800-225726600 Weak transcription NHEK skin
8 chr1:225707200-225726600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:225707200-225755000 Weak transcription Gastric stomach
10 chr1:225707400-225726600 Weak transcription Brain Angular Gyrus brain
11 chr1:225711400-225726600 Weak transcription Fetal Brain Female brain
12 chr1:225712400-225729600 Weak transcription Right Ventricle heart
13 chr1:225714800-225729600 Weak transcription Ovary ovary
14 chr1:225716800-225726400 Weak transcription Left Ventricle heart
15 chr1:225716800-225726400 Weak transcription Psoas Muscle Psoas
16 chr1:225717600-225726600 Weak transcription NHDF-Ad bronchial
17 chr1:225717600-225732000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:225717600-225744400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:225717800-225725800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:225717800-225729600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:225717800-225744400 Weak transcription Fetal Muscle Trunk muscle
22 chr1:225717800-225745000 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr1:225717800-225747400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:225717800-225747400 Weak transcription Fetal Stomach stomach
25 chr1:225717800-225758200 Weak transcription HepG2 liver
26 chr1:225718200-225727000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:225718400-225726800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:225718400-225732600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:225718400-225756400 Weak transcription NHLF lung
30 chr1:225718800-225726600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:225719000-225728000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:225719800-225727000 Enhancers HUES48 Cell Line embryonic stem cell
33 chr1:225719800-225730400 Enhancers HUES64 Cell Line embryonic stem cell
34 chr1:225720000-225726600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:225721000-225728600 Weak transcription Fetal Brain Male brain
36 chr1:225721400-225726600 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:225721400-225726600 Weak transcription HSMMtube muscle
38 chr1:225721600-225735200 Weak transcription HSMM muscle
39 chr1:225721800-225726600 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:225722000-225726400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:225722000-225726600 Weak transcription Fetal Heart heart
42 chr1:225722000-225727200 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr1:225722000-225729800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:225722800-225726600 Weak transcription Rectal Smooth Muscle rectum
45 chr1:225722800-225726600 Weak transcription A549 lung
46 chr1:225722800-225728000 Weak transcription Stomach Smooth Muscle stomach
47 chr1:225722800-225747600 Weak transcription Fetal Intestine Small intestine
48 chr1:225723000-225728200 Weak transcription Colon Smooth Muscle Colon
49 chr1:225723200-225739600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:225723400-225725800 Weak transcription H9 Cell Line embryonic stem cell

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