Variant report

Variant	rs17719
Chromosome Location	chr6:30711031-30711032
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:345)
CpG islands
(count:122)
Chromatin interactive
region (count:65)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:345 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr6:30710960-30711110	HPF	lung:	n/a	n/a
2	POLR2A	chr6:30710140-30711293	A549	lung:	n/a	n/a
3	PAX5	chr6:30710171-30711039	GM12892	blood:	n/a	n/a
4	POLR2A	chr6:30710032-30712587	K562	blood:	n/a	n/a
5	SMARCB1	chr6:30707405-30712696	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr6:30709185-30711328	SK-N-SH	brain:	n/a	n/a
7	BRCA1	chr6:30710091-30711409	Hela-S3	cervix:	n/a	n/a
8	ELF1	chr6:30710417-30711235	MCF-7	breast:	n/a	n/a
9	POLR2A	chr6:30709183-30712741	K562	blood:	n/a	n/a
10	POLR2A	chr6:30709565-30712522	GM18505	blood:	n/a	n/a
11	POLR2A	chr6:30709673-30711353	A549	lung:	n/a	n/a
12	POLR2A	chr6:30704670-30712656	Hela-S3	cervix:	n/a	n/a
13	POLR2A	chr6:30708838-30712666	HUVEC	blood vessel:	n/a	n/a
14	POLR2A	chr6:30708868-30712745	HCT-116	colon:	n/a	n/a
15	TBL1XR1	chr6:30710113-30711735	K562	blood:	n/a	n/a
16	REST	chr6:30709983-30711200	A549	lung:	n/a	chr6:30710250-30710268 chr6:30710864-30710877 chr6:30710681-30710694
17	TEAD4	chr6:30710312-30711049	A549	lung:	n/a	n/a
18	HMGN3	chr6:30709951-30711140	K562	blood:	n/a	n/a
19	ZNF143	chr6:30709335-30711398	Hela-S3	cervix:	n/a	chr6:30710926-30710944
20	POLR2A	chr6:30707434-30712732	PANC-1	pancreas:	n/a	n/a
21	POLR2A	chr6:30707893-30713121	HepG2	liver:	n/a	n/a
22	MYBL2	chr6:30709493-30712702	HepG2	liver:	n/a	n/a
23	BCLAF1	chr6:30710139-30711709	GM12878	blood:	n/a	chr6:30710267-30710280 chr6:30710688-30710697
24	MYC	chr6:30710398-30711044	HUVEC	blood vessel:	n/a	chr6:30710671-30710680
25	RAD21	chr6:30709386-30712657	HCT-116	colon:	n/a	chr6:30712416-30712429 chr6:30710226-30710239 chr6:30712391-30712405
26	PML	chr6:30709937-30711724	K562	blood:	n/a	n/a
27	FOSL2	chr6:30709959-30711296	MCF-7	breast:	n/a	chr6:30710567-30710576
28	SIN3AK20	chr6:30709484-30712745	HCT-116	colon:	n/a	n/a
29	MBD4	chr6:30709584-30712628	HepG2	liver:	n/a	n/a
30	POLR2A	chr6:30710067-30711295	K562	blood:	n/a	n/a
31	POLR2A	chr6:30709594-30712532	GM19193	blood:	n/a	n/a
32	TAF1	chr6:30710016-30711042	K562	blood:	n/a	n/a
33	SIN3AK20	chr6:30709089-30712768	HCT-116	colon:	n/a	n/a
34	ZNF263	chr6:30710693-30711591	K562	blood:	n/a	n/a
35	RAD21	chr6:30709942-30712560	Hela-S3	cervix:	n/a	chr6:30712416-30712429 chr6:30710226-30710239 chr6:30712391-30712405
36	YY1	chr6:30710117-30712650	HCT-116	colon:	n/a	chr6:30710265-30710276 chr6:30710286-30710297
37	CBX3	chr6:30709702-30712696	HCT-116	colon:	n/a	n/a
38	GATA3	chr6:30709695-30711537	A549	lung:	n/a	n/a
39	HDAC2	chr6:30710025-30711649	MCF-7	breast:	n/a	n/a
40	POLR2A	chr6:30709480-30711719	HepG2	liver:	n/a	n/a
41	HEY1	chr6:30710037-30711283	HepG2	liver:	n/a	chr6:30710563-30710578
42	JUND	chr6:30710028-30711437	A549	lung:	n/a	chr6:30710567-30710576
43	ZBTB33	chr6:30710455-30711047	HCT-116	colon:	n/a	n/a
44	TCF12	chr6:30709232-30712934	A549	lung:	n/a	chr6:30710631-30710641
45	POLR2A	chr6:30709477-30711350	GM12878	blood:	n/a	n/a
46	NR2C2	chr6:30709971-30711168	HepG2	liver:	n/a	n/a
47	POLR2A	chr6:30710170-30711681	GM10847	blood:	n/a	n/a
48	BHLHE40	chr6:30709936-30711357	K562	blood:	n/a	chr6:30710561-30710577
49	TAF1	chr6:30709903-30711238	ECC-1	luminal epithelium:	n/a	n/a
50	E2F4	chr6:30709933-30711102	K562	blood:	n/a	chr6:30710544-30710554 chr6:30710535-30710546 chr6:30710631-30710641

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:30711028-30711078	SK-N-SH_RA	brain:	n/a
2	chr6:30711022-30711072	HepG2	liver:	n/a
3	chr6:30711028-30711078	ECC-1	luminal epithelium:	n/a
4	chr6:30711022-30711072	BJ	skin:	n/a
5	chr6:30711022-30711072	GM12878	blood:	n/a
6	chr6:30711022-30711072	NHDF-neo	bronchial:	n/a
7	chr6:30711022-30711072	T-47D	breast:	n/a
8	chr6:30711028-30711078	H1-hESC	embryonic stem cell:	embryo
9	chr6:30711028-30711078	Jurkat	blood:	n/a
10	chr6:30711028-30711078	HL-60	blood:	n/a
11	chr6:30711022-30711072	A549	lung:	n/a
12	chr6:30711028-30711078	T-47D	breast:	n/a
13	chr6:30711028-30711078	NH-A	brain:	n/a
14	chr6:30711022-30711072	PrEC	prostate:	n/a
15	chr6:30711022-30711072	Caco-2	colon:	n/a
16	chr6:30711022-30711072	HCM	heart:	n/a
17	chr6:30711028-30711078	BE2_C	brain:	n/a
18	chr6:30711028-30711078	Hepatocyte	liver:	n/a
19	chr6:30711028-30711078	ProgFib	skin:	n/a
20	chr6:30711028-30711078	AG04450	lung:	fetal
21	chr6:30711022-30711072	GM06990	blood:	n/a
22	chr6:30711028-30711078	SAEC	small airway:	n/a
23	chr6:30711022-30711072	AG09319	gingival:	n/a
24	chr6:30711022-30711072	NB4	blood:	n/a
25	chr6:30711022-30711072	HNPCEpiC	eye:	n/a
26	chr6:30711022-30711072	SK-N-MC	brain:	n/a
27	chr6:30711028-30711078	HNPCEpiC	eye:	n/a
28	chr6:30711028-30711078	AoSMC	blood vessel:	n/a
29	chr6:30711022-30711072	HIPEpiC	eye:	n/a
30	chr6:30711022-30711072	SK-N-SH_RA	brain:	n/a
31	chr6:30711028-30711078	BJ	skin:	n/a
32	chr6:30711022-30711072	NHBE	bronchial:	n/a
33	chr6:30711028-30711078	HIPEpiC	eye:	n/a
34	chr6:30711028-30711078	MCF-7	breast:	n/a
35	chr6:30711022-30711072	PANC-1	pancreas:	n/a
36	chr6:30711028-30711078	HCPEpiC	choroid plexus:	n/a
37	chr6:30711022-30711072	BE2_C	brain:	n/a
38	chr6:30711028-30711078	SKMC	muscle:	n/a
39	chr6:30711028-30711078	GM19239	blood:	n/a
40	chr6:30711028-30711078	ovcar-3	ovarian:	n/a
41	chr6:30711028-30711078	HCM	heart:	n/a
42	chr6:30711022-30711072	AG04449	skin:	fetal
43	chr6:30711028-30711078	NHDF-neo	bronchial:	n/a
44	chr6:30711028-30711078	NHBE	bronchial:	n/a
45	chr6:30711022-30711072	HRCEpiC	kidney:	n/a
46	chr6:30711022-30711072	HEEpiC	esophagus:	n/a
47	chr6:30711022-30711072	NT2-D1	testis:	n/a
48	chr6:30711028-30711078	PFSK-1	brain:	n/a
49	chr6:30711028-30711078	AG09319	gingival:	n/a
50	chr6:30711028-30711078	HEK293	kidney:	embryo

(count:65 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:30707945..30712505-chr6:30840794..30847673,9	K562	blood:
2	chr5:153417075..153419525-chr6:30710164..30712570,2	MCF-7	breast:
3	chr10:75006773..75007660-chr6:30710327..30711162,2	Hela-S3	cervix:
4	chr6:30710580..30713200-chr6:30873655..30875872,3	K562	blood:
5	chr6:30571335..30573334-chr6:30711014..30713155,2	K562	blood:
6	chr5:10249561..10250207-chr6:30710708..30711209,2	Hela-S3	cervix:
7	chr6:30581322..30587794-chr6:30705649..30714068,32	K562	blood:
8	chr1:150334379..150337370-chr6:30710721..30713568,2	MCF-7	breast:
9	chr15:65596903..65597721-chr6:30710722..30711914,3	HCT-116	colon:
10	chr6:30703666..30722133-chr6:30776009..30801352,184	MCF-7	breast:
11	chr6:30521586..30526375-chr6:30710310..30712965,5	MCF-7	breast:
12	chr5:78531609..78532409-chr6:30710479..30711205,2	Hela-S3	cervix:
13	chr6:30537817..30539494-chr6:30709502..30712304,2	K562	blood:
14	chr10:28965974..28966488-chr6:30710611..30711154,2	HCT-116	colon:
15	chr19:49121814..49122407-chr6:30710426..30711383,2	Hela-S3	cervix:
16	chr17:8113443..8113944-chr6:30710380..30711137,2	HCT-116	colon:
17	chr6:30514422..30516321-chr6:30710847..30712439,2	MCF-7	breast:
18	chr6:30639079..30642784-chr6:30705636..30712325,12	MCF-7	breast:
19	chr17:56030673..56033156-chr6:30709392..30711627,2	MCF-7	breast:
20	chr6:30710692..30712313-chr6:30853038..30855427,2	K562	blood:
21	chr1:27189470..27190008-chr6:30710941..30711907,2	HCT-116	colon:
22	chr6:30710148..30713140-chr6:30864096..30868029,4	MCF-7	breast:
23	chr20:57556004..57557589-chr6:30709724..30711628,2	MCF-7	breast:
24	chr12:14923008..14923628-chr6:30710667..30711347,2	Hela-S3	cervix:
25	chr6:30710558..30711086-chr9:74979610..74980181,2	HCT-116	colon:
26	chr17:16256179..16256981-chr6:30710207..30711099,2	Hela-S3	cervix:
27	chr6:30707481..30713943-chr6:30872979..30880006,10	MCF-7	breast:
28	chr6:30614009..30615526-chr6:30709280..30711034,2	MCF-7	breast:
29	chr6:30709387..30712006-chr6:30881214..30883426,2	K562	blood:
30	chr6:30578948..30585851-chr6:30707403..30713755,14	MCF-7	breast:
31	chr6:30705171..30717521-chr6:30843972..30856100,74	MCF-7	breast:
32	chr5:159826591..159827300-chr6:30710847..30711365,2	Hela-S3	cervix:
33	chr6:30709658..30711296-chr6:30861145..30862930,2	MCF-7	breast:
34	chr15:65588162..65588741-chr6:30710571..30711327,2	Hela-S3	cervix:
35	chr6:30709801..30712369-chr9:116163469..116165342,2	MCF-7	breast:
36	chr11:65266464..65267056-chr6:30710321..30711099,2	Hela-S3	cervix:
37	chr6:30580645..30587403-chr6:30708153..30714600,16	MCF-7	breast:
38	chr6:30710496..30711487-chr9:130953547..130954466,2	Hela-S3	cervix:
39	chr6:30704403..30722478-chr6:30842859..30858629,100	MCF-7	breast:
40	chr6:30710804..30712449-chr6:33376908..33379450,2	MCF-7	breast:
41	chr6:30710972..30711854-chr7:45019522..45020496,2	Hela-S3	cervix:
42	chr6:30709669..30712213-chr6:30880810..30882538,2	MCF-7	breast:
43	chr6:30703055..30723531-chr6:30783853..30800217,151	MCF-7	breast:
44	chr17:57918223..57923763-chr6:30707801..30713436,10	MCF-7	breast:
45	chr6:30594160..30596394-chr6:30709286..30711112,2	MCF-7	breast:
46	chr4:40056827..40059245-chr6:30710214..30712431,2	MCF-7	breast:
47	chr6:30710424..30713995-chr6:30746295..30752430,9	K562	blood:
48	chr12:58166150..58166770-chr6:30710132..30711087,2	Hela-S3	cervix:
49	chr1:151512428..151513209-chr6:30710651..30711197,2	Hela-S3	cervix:
50	chr10:79793635..79794334-chr6:30710644..30711608,2	Hela-S3	cervix:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TUBB-14	chr6:30711011-30711682	NONHSAT108675
2	lnc-TUBB-14	chr6:30711011-30711393	NONHSAT108676
3	lnc-TUBB-14	chr6:30711011-30711369	ENSG00000272273.1

No data

Variant related genes	Relation type
FLOT1	TF binding region
FLOT1	CpG island
ENSG00000101158	Chromatin interaction
ENSG00000143367	Chromatin interaction
ENSG00000264731	Chromatin interaction
ENSG00000100084	Chromatin interaction
ENSG00000092931	Chromatin interaction
ENSG00000204568	Chromatin interaction
ENSG00000148337	Chromatin interaction
ENSG00000055147	Chromatin interaction
ENSG00000078177	Chromatin interaction
ENSG00000095739	Chromatin interaction
ENSG00000150756	Chromatin interaction
ENSG00000161547	Chromatin interaction
ENSG00000205794	Chromatin interaction
ENSG00000251562	Chromatin interaction
ENSG00000118515	Chromatin interaction
ENSG00000237775	Chromatin interaction
ENSG00000221886	Chromatin interaction
ENSG00000165458	Chromatin interaction
ENSG00000228022	Chromatin interaction
ENSG00000236756	Chromatin interaction
ENSG00000138326	Chromatin interaction
ENSG00000204576	Chromatin interaction
ENSG00000175793	Chromatin interaction
ENSG00000137343	Chromatin interaction
ENSG00000062725	Chromatin interaction
ENSG00000148218	Chromatin interaction
ENSG00000133858	Chromatin interaction
ENSG00000222894	Chromatin interaction
ENSG00000166582	Chromatin interaction
ENSG00000063177	Chromatin interaction
ENSG00000201524	Chromatin interaction
ENSG00000204560	Chromatin interaction
ENSG00000204569	Chromatin interaction
ENSG00000112511	Chromatin interaction
ENSG00000204564	Chromatin interaction
ENSG00000037749	Chromatin interaction
ENSG00000204580	Chromatin interaction
ENSG00000204590	Chromatin interaction
ENSG00000199004	Chromatin interaction
ENSG00000178999	Chromatin interaction
ENSG00000199568	Chromatin interaction
ENSG00000214894	Chromatin interaction
ENSG00000157429	Chromatin interaction
ENSG00000213780	Chromatin interaction
ENSG00000137411	Chromatin interaction
ENSG00000185608	Chromatin interaction
ENSG00000165417	Chromatin interaction
ENSG00000200156	Chromatin interaction
ENSG00000197837	Chromatin interaction
ENSG00000152409	Chromatin interaction
ENSG00000100889	Chromatin interaction
ENSG00000123427	Chromatin interaction
ENSG00000107372	Chromatin interaction
ENSG00000180891	Chromatin interaction
ENSG00000146112	Chromatin interaction
ENSG00000132837	Chromatin interaction
ENSG00000150753	Chromatin interaction
ENSG00000204574	Chromatin interaction
ENSG00000037897	Chromatin interaction
ENSG00000232536	Chromatin interaction
ENSG00000163125	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1049943	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1061397	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1061424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10947088	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10947089	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1136719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12111310	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1264352	0.83[ASN][1000 genomes]
rs15297	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17189329	0.85[ASN][1000 genomes]
rs17195712	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28600807	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3094128	0.97[ASN][1000 genomes]
rs3130662	1.00[ASN][1000 genomes]
rs3909184	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41270529	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58638768	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968884	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968888	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968960	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9969042	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3519970	chr6:30382942-31378788	Genic enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
2	esv3519971	chr6:30382942-31378788	Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
3	nsv601481	chr6:30422632-31284253	Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1012 gene(s)	inside rSNPs	diseases
4	esv3430377	chr6:30443802-30814426	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	967 gene(s)	inside rSNPs	diseases
5	nsv830626	chr6:30558064-30732905	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	406 gene(s)	inside rSNPs	diseases
6	esv2758041	chr6:30644693-30816319	Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	223 gene(s)	inside rSNPs	diseases
7	esv2759413	chr6:30644693-30816319	Active TSS Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	223 gene(s)	inside rSNPs	diseases
8	nsv884100	chr6:30693816-30751326	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
9	nsv884101	chr6:30695920-30733121	Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	163 gene(s)	inside rSNPs	diseases
10	nsv1015372	chr6:30704734-31582152	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
11	nsv538173	chr6:30704734-31582152	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
12	nsv884102	chr6:30706013-30720567	Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	158 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30709000-30711200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr6:30709200-30712600	Flanking Active TSS	Primary B cells from cord blood	blood
3	chr6:30709200-30712600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:30709200-30712600	Active TSS	Pancreatic Islets	Pancreatic Islet
5	chr6:30709200-30712600	Active TSS	HSMM	muscle
6	chr6:30709400-30712200	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr6:30709400-30712400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
8	chr6:30709600-30712400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:30709600-30712400	Active TSS	Small Intestine	intestine
10	chr6:30709600-30712400	Active TSS	NHDF-Ad	bronchial
11	chr6:30709600-30712600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
12	chr6:30709600-30712600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr6:30709600-30712600	Active TSS	Gastric	stomach
14	chr6:30709600-30712600	Active TSS	Placenta Amnion	Placenta Amnion
15	chr6:30709600-30712800	Active TSS	HUES48 Cell Line	embryonic stem cell
16	chr6:30709600-30713000	Active TSS	H9 Cell Line	embryonic stem cell
17	chr6:30709600-30713200	Active TSS	ES-I3 Cell Line	embryonic stem cell
18	chr6:30709800-30711400	Active TSS	HUES64 Cell Line	embryonic stem cell
19	chr6:30709800-30712400	Active TSS	Fetal Heart	heart
20	chr6:30709800-30712400	Active TSS	Lung	lung
21	chr6:30709800-30712400	Active TSS	Sigmoid Colon	Sigmoid Colon
22	chr6:30709800-30712600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr6:30709800-30712600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
24	chr6:30709800-30712600	Active TSS	Duodenum Smooth Muscle	Duodenum
25	chr6:30709800-30712600	Active TSS	Left Ventricle	heart
26	chr6:30709800-30712600	Active TSS	Ovary	ovary
27	chr6:30709800-30712800	Active TSS	iPS-18 Cell Line	embryonic stem cell
28	chr6:30709800-30712800	Active TSS	Fetal Kidney	kidney
29	chr6:30709800-30712800	Active TSS	Right Ventricle	heart
30	chr6:30709800-30713000	Active TSS	iPS-20b Cell Line	embryonic stem cell
31	chr6:30710000-30711200	Active TSS	H1 Cell Line	embryonic stem cell
32	chr6:30710000-30711200	Active TSS	Brain Germinal Matrix	brain
33	chr6:30710000-30711200	Active TSS	Brain Substantia Nigra	brain
34	chr6:30710000-30711200	Active TSS	Thymus	Thymus
35	chr6:30710000-30712400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr6:30710000-30712400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr6:30710000-30712400	Active TSS	Primary neutrophils fromperipheralblood	blood
38	chr6:30710000-30712400	Active TSS	Liver	Liver
39	chr6:30710000-30712400	Active TSS	Colonic Mucosa	Colon
40	chr6:30710000-30712400	Active TSS	Colon Smooth Muscle	Colon
41	chr6:30710000-30712400	Active TSS	Esophagus	oesophagus
42	chr6:30710000-30712400	Active TSS	Fetal Stomach	stomach
43	chr6:30710000-30712400	Active TSS	Rectal Mucosa Donor 29	rectum
44	chr6:30710000-30712400	Active TSS	Stomach Mucosa	stomach
45	chr6:30710000-30712400	Active TSS	Stomach Smooth Muscle	stomach
46	chr6:30710000-30712400	Active TSS	Hela-S3	cervix
47	chr6:30710000-30712400	Active TSS	HUVEC	blood vessel
48	chr6:30710000-30712400	Active TSS	Osteobl	bone
49	chr6:30710000-30712600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr6:30710000-30712600	Active TSS	Brain Angular Gyrus	brain

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