Variant report

Variant	rs28600807
Chromosome Location	chr6:30710234-30710235
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:439)
CpG islands
(count:61)
Chromatin interactive
region (count:56)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:439 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZBTB33	chr6:30710073-30710978	SK-N-SH	brain:	n/a	n/a
2	POLR2A	chr6:30710140-30711293	A549	lung:	n/a	n/a
3	PAX5	chr6:30710171-30711039	GM12892	blood:	n/a	n/a
4	POLR2A	chr6:30710032-30712587	K562	blood:	n/a	n/a
5	BCL3	chr6:30710230-30710993	GM12878	blood:	n/a	chr6:30710267-30710280 chr6:30710688-30710697
6	SMARCB1	chr6:30707405-30712696	Hela-S3	cervix:	n/a	n/a
7	POLR2A	chr6:30709185-30711328	SK-N-SH	brain:	n/a	n/a
8	ELF1	chr6:30709844-30710948	HepG2	liver:	n/a	n/a
9	BRCA1	chr6:30710091-30711409	Hela-S3	cervix:	n/a	n/a
10	POLR2A	chr6:30709183-30712741	K562	blood:	n/a	n/a
11	POLR2A	chr6:30709565-30712522	GM18505	blood:	n/a	n/a
12	POLR2A	chr6:30709673-30711353	A549	lung:	n/a	n/a
13	ZBTB7A	chr6:30710141-30710788	HepG2	liver:	n/a	chr6:30710531-30710538
14	POLR2A	chr6:30704670-30712656	Hela-S3	cervix:	n/a	n/a
15	POLR2A	chr6:30708838-30712666	HUVEC	blood vessel:	n/a	n/a
16	ELF1	chr6:30709851-30710994	K562	blood:	n/a	n/a
17	TAF1	chr6:30710133-30710753	SK-N-SH	brain:	n/a	n/a
18	FOS	chr6:30709949-30710345	MCF10A-Er-Src	breast:	n/a	n/a
19	RAD21	chr6:30710228-30710426	H1-hESC	embryonic stem cell:	n/a	n/a
20	POLR2A	chr6:30708868-30712745	HCT-116	colon:	n/a	n/a
21	TBL1XR1	chr6:30710113-30711735	K562	blood:	n/a	n/a
22	REST	chr6:30709983-30711200	A549	lung:	n/a	chr6:30710250-30710268 chr6:30710864-30710877 chr6:30710681-30710694
23	ZNF143	chr6:30710073-30710864	GM12878	blood:	n/a	n/a
24	EP300	chr6:30710102-30710985	GM12878	blood:	n/a	n/a
25	HMGN3	chr6:30709951-30711140	K562	blood:	n/a	n/a
26	ZNF143	chr6:30709335-30711398	Hela-S3	cervix:	n/a	chr6:30710926-30710944
27	TEAD4	chr6:30710225-30710874	H1-hESC	embryonic stem cell:	n/a	n/a
28	POLR2A	chr6:30709840-30710912	PFSK-1	brain:	n/a	n/a
29	MXI1	chr6:30709821-30710933	GM12878	blood:	n/a	n/a
30	POLR2A	chr6:30707434-30712732	PANC-1	pancreas:	n/a	n/a
31	POLR2A	chr6:30707893-30713121	HepG2	liver:	n/a	n/a
32	MYBL2	chr6:30709493-30712702	HepG2	liver:	n/a	n/a
33	BCLAF1	chr6:30710139-30711709	GM12878	blood:	n/a	chr6:30710267-30710280 chr6:30710688-30710697
34	RAD21	chr6:30709386-30712657	HCT-116	colon:	n/a	chr6:30712416-30712429 chr6:30710226-30710239 chr6:30712391-30712405
35	PML	chr6:30709937-30711724	K562	blood:	n/a	n/a
36	FOSL2	chr6:30709959-30711296	MCF-7	breast:	n/a	chr6:30710567-30710576
37	SIN3AK20	chr6:30709484-30712745	HCT-116	colon:	n/a	n/a
38	MBD4	chr6:30709584-30712628	HepG2	liver:	n/a	n/a
39	POLR2A	chr6:30710067-30711295	K562	blood:	n/a	n/a
40	POLR2A	chr6:30709594-30712532	GM19193	blood:	n/a	n/a
41	RAD21	chr6:30710026-30710912	A549	lung:	n/a	chr6:30710226-30710239
42	TAF1	chr6:30710016-30711042	K562	blood:	n/a	n/a
43	SIN3AK20	chr6:30709089-30712768	HCT-116	colon:	n/a	n/a
44	RAD21	chr6:30709942-30712560	Hela-S3	cervix:	n/a	chr6:30712416-30712429 chr6:30710226-30710239 chr6:30712391-30712405
45	MYC	chr6:30709940-30710990	K562	blood:	n/a	chr6:30710671-30710680
46	YY1	chr6:30710117-30712650	HCT-116	colon:	n/a	chr6:30710265-30710276 chr6:30710286-30710297
47	FOXA2	chr6:30710109-30710962	A549	lung:	n/a	n/a
48	EGR1	chr6:30710117-30711019	K562	blood:	n/a	chr6:30710669-30710682 chr6:30710670-30710681 chr6:30710670-30710679 chr6:30710670-30710681 chr6:30710670-30710680 chr6:30710670-30710680 chr6:30710669-30710682 chr6:30710668-30710682 chr6:30710566-30710576 chr6:30710669-30710682
49	SIN3AK20	chr6:30710138-30710896	K562	blood:	n/a	n/a
50	CBX3	chr6:30709702-30712696	HCT-116	colon:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:30710200-30710250	AG04450	lung:	fetal
2	chr6:30710200-30710250	NHBE	bronchial:	n/a
3	chr6:30710200-30710250	AG10803	skin:	n/a
4	chr6:30710200-30710250	NHDF-neo	bronchial:	n/a
5	chr6:30710200-30710250	T-47D	breast:	n/a
6	chr6:30710200-30710250	U87	brain:	n/a
7	chr6:30710200-30710250	HCM	heart:	n/a
8	chr6:30710200-30710250	NT2-D1	testis:	n/a
9	chr6:30710200-30710250	HRE	kidney:	n/a
10	chr6:30710200-30710250	GM06990	blood:	n/a
11	chr6:30710200-30710250	ovcar-3	ovarian:	n/a
12	chr6:30710200-30710250	HRCEpiC	kidney:	n/a
13	chr6:30710200-30710250	SK-N-SH	brain:	n/a
14	chr6:30710200-30710250	A549	lung:	n/a
15	chr6:30710200-30710250	GM12891	blood:	n/a
16	chr6:30710200-30710250	HCF	heart:	n/a
17	chr6:30710200-30710250	HL-60	blood:	n/a
18	chr6:30710200-30710250	HCT-116	colon:	n/a
19	chr6:30710200-30710250	PFSK-1	brain:	n/a
20	chr6:30710200-30710250	HAEpiC	amniotic membrane:	n/a
21	chr6:30710200-30710250	H1-hESC	embryonic stem cell:	embryo
22	chr6:30710200-30710250	SK-N-MC	brain:	n/a
23	chr6:30710200-30710250	HPAEpiC	pulmonary alveolar:	n/a
24	chr6:30710200-30710250	Caco-2	colon:	n/a
25	chr6:30710200-30710250	NH-A	brain:	n/a
26	chr6:30710200-30710250	CMK	blood:	n/a
27	chr6:30710200-30710250	Hela-S3	cervix:	n/a
28	chr6:30710200-30710250	K562	blood:	n/a
29	chr6:30710200-30710250	GM19239	blood:	n/a
30	chr6:30710200-30710250	MCF-7	breast:	n/a
31	chr6:30710200-30710250	BE2_C	brain:	n/a
32	chr6:30710200-30710250	SK-N-SH_RA	brain:	n/a
33	chr6:30710200-30710250	SKMC	muscle:	n/a
34	chr6:30710200-30710250	AG04449	skin:	fetal
35	chr6:30710200-30710250	GM12878	blood:	n/a
36	chr6:30710200-30710250	HNPCEpiC	eye:	n/a
37	chr6:30710200-30710250	HEK293	kidney:	embryo
38	chr6:30710200-30710250	HRPEpiC	eye:	n/a
39	chr6:30710200-30710250	GM12892	blood:	n/a
40	chr6:30710200-30710250	PANC-1	pancreas:	n/a
41	chr6:30710200-30710250	PrEC	prostate:	n/a
42	chr6:30710200-30710250	HEEpiC	esophagus:	n/a
43	chr6:30710200-30710250	HepG2	liver:	n/a
44	chr6:30710200-30710250	NB4	blood:	n/a
45	chr6:30710200-30710250	ECC-1	luminal epithelium:	n/a
46	chr6:30710200-30710250	LNCaP	prostate:	n/a
47	chr6:30710200-30710250	SAEC	small airway:	n/a
48	chr6:30710200-30710250	HMEC	breast:	n/a
49	chr6:30710200-30710250	AG09319	gingival:	n/a
50	chr6:30710200-30710250	HIPEpiC	eye:	n/a

(count:56 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:30707945..30712505-chr6:30840794..30847673,9	K562	blood:
2	chr5:153417075..153419525-chr6:30710164..30712570,2	MCF-7	breast:
3	chr19:18391743..18392810-chr6:30710116..30710770,3	Hela-S3	cervix:
4	chr4:169931154..169931899-chr6:30709913..30710786,2	Hela-S3	cervix:
5	chr1:117451768..117453895-chr6:30707960..30710700,2	MCF-7	breast:
6	chr6:30709662..30710325-chr6:108881667..108882432,2	Hela-S3	cervix:
7	chr2:32581282..32582339-chr6:30709753..30710619,3	Hela-S3	cervix:
8	chr6:30709897..30710718-chr6:75994395..75995294,2	Hela-S3	cervix:
9	chr19:59030648..59031170-chr6:30709871..30710769,2	Hela-S3	cervix:
10	chr6:30581322..30587794-chr6:30705649..30714068,32	K562	blood:
11	chr19:10764324..10765008-chr6:30710196..30710705,2	HCT-116	colon:
12	chr17:66287542..66288533-chr6:30709834..30710460,2	HCT-116	colon:
13	chr6:30703666..30722133-chr6:30776009..30801352,184	MCF-7	breast:
14	chr12:6643028..6643863-chr6:30709743..30710630,2	Hela-S3	cervix:
15	chr6:30537817..30539494-chr6:30709502..30712304,2	K562	blood:
16	chr6:30639079..30642784-chr6:30705636..30712325,12	MCF-7	breast:
17	chr6:30710080..30710745-chr7:100025969..100026517,2	Hela-S3	cervix:
18	chr17:56030673..56033156-chr6:30709392..30711627,2	MCF-7	breast:
19	chr6:30710148..30713140-chr6:30864096..30868029,4	MCF-7	breast:
20	chr20:57556004..57557589-chr6:30709724..30711628,2	MCF-7	breast:
21	chr17:16256179..16256981-chr6:30710207..30711099,2	Hela-S3	cervix:
22	chr6:30707481..30713943-chr6:30872979..30880006,10	MCF-7	breast:
23	chr11:18415590..18416496-chr6:30710163..30710987,2	HCT-116	colon:
24	chr6:30614009..30615526-chr6:30709280..30711034,2	MCF-7	breast:
25	chr6:30709387..30712006-chr6:30881214..30883426,2	K562	blood:
26	chr6:30578948..30585851-chr6:30707403..30713755,14	MCF-7	breast:
27	chr6:30705171..30717521-chr6:30843972..30856100,74	MCF-7	breast:
28	chr1:145381364..145383003-chr6:30708944..30710900,2	MCF-7	breast:
29	chr1:27319962..27320517-chr6:30710130..30710650,2	HCT-116	colon:
30	chr6:30709658..30711296-chr6:30861145..30862930,2	MCF-7	breast:
31	chr6:30709801..30712369-chr9:116163469..116165342,2	MCF-7	breast:
32	chr6:30580645..30587403-chr6:30708153..30714600,16	MCF-7	breast:
33	chr11:82996745..82997289-chr6:30709394..30710375,2	Hela-S3	cervix:
34	chr6:30704403..30722478-chr6:30842859..30858629,100	MCF-7	breast:
35	chr11:62495454..62497939-chr6:30709047..30710768,2	MCF-7	breast:
36	chr6:30709669..30712213-chr6:30880810..30882538,2	MCF-7	breast:
37	chr6:30703055..30723531-chr6:30783853..30800217,151	MCF-7	breast:
38	chr6:30709563..30710317-chr8:91657123..91658008,2	Hela-S3	cervix:
39	chr17:57918223..57923763-chr6:30707801..30713436,10	MCF-7	breast:
40	chr6:30710077..30710627-chr8:145597461..145598099,2	HCT-116	colon:
41	chr6:30594160..30596394-chr6:30709286..30711112,2	MCF-7	breast:
42	chr4:40056827..40059245-chr6:30710214..30712431,2	MCF-7	breast:
43	chr12:58166150..58166770-chr6:30710132..30711087,2	Hela-S3	cervix:
44	chr2:3522722..3523403-chr6:30709888..30710597,2	Hela-S3	cervix:
45	chr19:59084038..59084620-chr6:30709785..30710614,2	Hela-S3	cervix:
46	chr6:30537121..30539529-chr6:30708411..30710426,2	MCF-7	breast:
47	chr6:30710126..30710645-chr8:22224287..22224804,2	Hela-S3	cervix:
48	chr6:30708700..30710764-chr6:30734085..30735975,2	K562	blood:
49	chr15:60687645..60690491-chr6:30708468..30710482,2	MCF-7	breast:
50	chr17:57922134..57925818-chr6:30708673..30712845,6	MCF-7	breast:

No data

Variant related genes	Relation type
FLOT1	TF binding region
ENSG00000272273	TF binding region
FLOT1	CpG island
ENSG00000272273	CpG island
ENSG00000253368	Chromatin interaction
ENSG00000264731	Chromatin interaction
ENSG00000200156	Chromatin interaction
ENSG00000166582	Chromatin interaction
ENSG00000134247	Chromatin interaction
ENSG00000214894	Chromatin interaction
ENSG00000123427	Chromatin interaction
ENSG00000119574	Chromatin interaction
ENSG00000225793	Chromatin interaction
ENSG00000146834	Chromatin interaction
ENSG00000092931	Chromatin interaction
ENSG00000201524	Chromatin interaction
ENSG00000204560	Chromatin interaction
ENSG00000118689	Chromatin interaction
ENSG00000148218	Chromatin interaction
ENSG00000161547	Chromatin interaction
ENSG00000180891	Chromatin interaction
ENSG00000180694	Chromatin interaction
ENSG00000213780	Chromatin interaction
ENSG00000182718	Chromatin interaction
ENSG00000173137	Chromatin interaction
ENSG00000134333	Chromatin interaction
ENSG00000204580	Chromatin interaction
ENSG00000255234	Chromatin interaction
ENSG00000251445	Chromatin interaction
ENSG00000078487	Chromatin interaction
ENSG00000037749	Chromatin interaction
ENSG00000137343	Chromatin interaction
ENSG00000037897	Chromatin interaction
ENSG00000267100	Chromatin interaction
ENSG00000145439	Chromatin interaction
ENSG00000104635	Chromatin interaction
ENSG00000078177	Chromatin interaction
ENSG00000204569	Chromatin interaction
ENSG00000235078	Chromatin interaction
ENSG00000204574	Chromatin interaction
ENSG00000204564	Chromatin interaction
ENSG00000129351	Chromatin interaction
ENSG00000165417	Chromatin interaction
ENSG00000146112	Chromatin interaction
ENSG00000111640	Chromatin interaction
ENSG00000100084	Chromatin interaction
ENSG00000199004	Chromatin interaction
ENSG00000201558	Chromatin interaction
ENSG00000237775	Chromatin interaction
ENSG00000228022	Chromatin interaction
ENSG00000115760	Chromatin interaction
ENSG00000099326	Chromatin interaction
ENSG00000137411	Chromatin interaction
ENSG00000185608	Chromatin interaction
ENSG00000141337	Chromatin interaction
ENSG00000162222	Chromatin interaction
ENSG00000137500	Chromatin interaction
ENSG00000233396	Chromatin interaction
ENSG00000204568	Chromatin interaction
ENSG00000205794	Chromatin interaction
ENSG00000101158	Chromatin interaction
ENSG00000272715	Chromatin interaction
ENSG00000055147	Chromatin interaction
ENSG00000112697	Chromatin interaction
ENSG00000222894	Chromatin interaction
ENSG00000130522	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1049943	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1061397	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1061424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10947088	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10947089	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1136719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12111310	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1264352	0.83[ASN][1000 genomes]
rs15297	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17189329	0.85[ASN][1000 genomes]
rs17195712	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3094128	0.97[ASN][1000 genomes]
rs3130662	1.00[ASN][1000 genomes]
rs3909184	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41270529	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58638768	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968884	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968888	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968960	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9969042	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3519970	chr6:30382942-31378788	Genic enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
2	esv3519971	chr6:30382942-31378788	Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
3	nsv601481	chr6:30422632-31284253	Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1012 gene(s)	inside rSNPs	diseases
4	esv3430377	chr6:30443802-30814426	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	967 gene(s)	inside rSNPs	diseases
5	nsv830626	chr6:30558064-30732905	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	406 gene(s)	inside rSNPs	diseases
6	esv2758041	chr6:30644693-30816319	Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	223 gene(s)	inside rSNPs	diseases
7	esv2759413	chr6:30644693-30816319	Active TSS Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	223 gene(s)	inside rSNPs	diseases
8	nsv970736	chr6:30692055-30710740	Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	112 gene(s)	inside rSNPs	diseases
9	nsv884100	chr6:30693816-30751326	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
10	nsv884101	chr6:30695920-30733121	Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	163 gene(s)	inside rSNPs	diseases
11	nsv1015372	chr6:30704734-31582152	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
12	nsv538173	chr6:30704734-31582152	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
13	nsv884102	chr6:30706013-30720567	Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	158 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30708800-30710400	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
2	chr6:30709000-30710800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr6:30709000-30711200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr6:30709200-30710800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:30709200-30712600	Flanking Active TSS	Primary B cells from cord blood	blood
6	chr6:30709200-30712600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:30709200-30712600	Active TSS	Pancreatic Islets	Pancreatic Islet
8	chr6:30709200-30712600	Active TSS	HSMM	muscle
9	chr6:30709400-30710400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
10	chr6:30709400-30710800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr6:30709400-30710800	Transcr. at gene 5' and 3'	Right Atrium	heart
12	chr6:30709400-30712200	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr6:30709400-30712400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
14	chr6:30709600-30712400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr6:30709600-30712400	Active TSS	Small Intestine	intestine
16	chr6:30709600-30712400	Active TSS	NHDF-Ad	bronchial
17	chr6:30709600-30712600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
18	chr6:30709600-30712600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:30709600-30712600	Active TSS	Gastric	stomach
20	chr6:30709600-30712600	Active TSS	Placenta Amnion	Placenta Amnion
21	chr6:30709600-30712800	Active TSS	HUES48 Cell Line	embryonic stem cell
22	chr6:30709600-30713000	Active TSS	H9 Cell Line	embryonic stem cell
23	chr6:30709600-30713200	Active TSS	ES-I3 Cell Line	embryonic stem cell
24	chr6:30709800-30710600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr6:30709800-30710600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr6:30709800-30710800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr6:30709800-30710800	Active TSS	A549	lung
28	chr6:30709800-30710800	Active TSS	NHLF	lung
29	chr6:30709800-30711000	Active TSS	HUES6 Cell Line	embryonic stem cell
30	chr6:30709800-30711000	Active TSS	iPS-15b Cell Line	embryonic stem cell
31	chr6:30709800-30711000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
32	chr6:30709800-30711000	Active TSS	Muscle Satellite Cultured Cells	--
33	chr6:30709800-30711000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr6:30709800-30711000	Active TSS	Fetal Intestine Large	intestine
35	chr6:30709800-30711000	Active TSS	Spleen	Spleen
36	chr6:30709800-30711000	Active TSS	GM12878-XiMat	blood
37	chr6:30709800-30711400	Active TSS	HUES64 Cell Line	embryonic stem cell
38	chr6:30709800-30712400	Active TSS	Fetal Heart	heart
39	chr6:30709800-30712400	Active TSS	Lung	lung
40	chr6:30709800-30712400	Active TSS	Sigmoid Colon	Sigmoid Colon
41	chr6:30709800-30712600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr6:30709800-30712600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
43	chr6:30709800-30712600	Active TSS	Duodenum Smooth Muscle	Duodenum
44	chr6:30709800-30712600	Active TSS	Left Ventricle	heart
45	chr6:30709800-30712600	Active TSS	Ovary	ovary
46	chr6:30709800-30712800	Active TSS	iPS-18 Cell Line	embryonic stem cell
47	chr6:30709800-30712800	Active TSS	Fetal Kidney	kidney
48	chr6:30709800-30712800	Active TSS	Right Ventricle	heart
49	chr6:30709800-30713000	Active TSS	iPS-20b Cell Line	embryonic stem cell
50	chr6:30710000-30710600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived

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