Variant report
| Variant | rs17722929 |
|---|---|
| Chromosome Location | chr5:58443327-58443328 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:58424000-58447000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 2 | chr5:58424200-58446200 | Weak transcription | Fetal Intestine Large | intestine |
| 3 | chr5:58424200-58446600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 4 | chr5:58427200-58454000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 5 | chr5:58429800-58447200 | Weak transcription | Left Ventricle | heart |
| 6 | chr5:58433000-58451600 | Weak transcription | Fetal Muscle Leg | muscle |
| 7 | chr5:58437400-58454000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 8 | chr5:58437800-58444800 | Weak transcription | Psoas Muscle | Psoas |
| 9 | chr5:58438000-58445200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 10 | chr5:58439000-58484000 | Weak transcription | Fetal Kidney | kidney |
| 11 | chr5:58440000-58447000 | Weak transcription | Stomach Mucosa | stomach |
| 12 | chr5:58440200-58444600 | Weak transcription | Colon Smooth Muscle | Colon |
| 13 | chr5:58440200-58448600 | Weak transcription | Brain Anterior Caudate | brain |
| 14 | chr5:58440600-58444800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 15 | chr5:58440600-58447000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 16 | chr5:58441000-58443800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 17 | chr5:58441200-58446600 | Weak transcription | Fetal Heart | heart |
| 18 | chr5:58442400-58443600 | ZNF genes & repeats | A549 | lung |
| 19 | chr5:58442400-58448600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 20 | chr5:58442600-58443600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 21 | chr5:58443000-58443400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 22 | chr5:58443000-58447000 | Weak transcription | Primary T cells from cord blood | blood |
| 23 | chr5:58443000-58447400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 24 | chr5:58443000-58447600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 25 | chr5:58443200-58445800 | Weak transcription | Hela-S3 | cervix |
| 26 | chr5:58443200-58447000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 27 | chr5:58443200-58447000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
