The 2.0 version of rSNPBase

Variant report

Variant rs17729519
Chromosome Location chr1:214498421-214498422
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214471000-214517400 Weak transcription Fetal Kidney kidney
2 chr1:214477400-214506400 Weak transcription Colon Smooth Muscle Colon
3 chr1:214477400-214506400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:214477400-214511000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:214479000-214503000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:214482200-214510600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:214483600-214501600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:214484400-214499800 Weak transcription Primary hematopoietic stem cells blood
9 chr1:214484400-214510800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:214484800-214501800 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:214484800-214507800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:214484800-214522000 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:214485000-214506400 Weak transcription Rectal Smooth Muscle rectum
14 chr1:214485000-214513200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:214485600-214499600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:214485800-214499600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:214486200-214526000 Weak transcription Psoas Muscle Psoas
18 chr1:214487400-214502600 Weak transcription Colonic Mucosa Colon
19 chr1:214487400-214509400 Strong transcription Primary T cells from cord blood blood
20 chr1:214487600-214506200 Weak transcription Small Intestine intestine
21 chr1:214487800-214510600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:214488200-214499000 Strong transcription Primary T helper cells fromperipheralblood blood
23 chr1:214488200-214500400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:214488200-214517600 Weak transcription Brain Germinal Matrix brain
25 chr1:214488200-214520800 Weak transcription Hela-S3 cervix
26 chr1:214488800-214510600 Weak transcription Fetal Brain Male brain
27 chr1:214489400-214506200 Weak transcription A549 lung
28 chr1:214489400-214506600 Weak transcription Ovary ovary
29 chr1:214490200-214501800 Weak transcription NHLF lung
30 chr1:214490200-214502400 Weak transcription Placenta Placenta
31 chr1:214490400-214502400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:214490800-214518200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:214491000-214503400 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:214491600-214506000 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr1:214491800-214500400 Weak transcription HUVEC blood vessel
36 chr1:214492600-214499600 Weak transcription Adipose Nuclei Adipose
37 chr1:214492600-214499800 Weak transcription Lung lung
38 chr1:214492600-214501000 Weak transcription Spleen Spleen
39 chr1:214492600-214502200 Weak transcription Pancreas Pancrea
40 chr1:214492600-214502400 Weak transcription Muscle Satellite Cultured Cells --
41 chr1:214492600-214502400 Weak transcription HSMMtube muscle
42 chr1:214492800-214501600 Weak transcription Right Ventricle heart
43 chr1:214492800-214502800 Weak transcription Thymus Thymus
44 chr1:214492800-214509200 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr1:214493000-214501600 Weak transcription Duodenum Mucosa Duodenum
46 chr1:214493000-214502400 Weak transcription NHDF-Ad bronchial
47 chr1:214493000-214502400 Weak transcription Osteobl bone
48 chr1:214493000-214502600 Weak transcription Esophagus oesophagus
49 chr1:214493000-214505400 Weak transcription HMEC breast
50 chr1:214493000-214510600 Weak transcription Aorta Aorta

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015