Variant report

Variant	rs17775555
Chromosome Location	chr7:14415835-14415836
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12154315	1.00[YRI][hapmap]
rs17168017	1.00[YRI][hapmap]
rs17168080	1.00[YRI][hapmap]
rs35689654	1.00[ASN][1000 genomes]
rs35787627	1.00[ASN][1000 genomes]
rs7798729	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606281	chr7:14388381-14443963	Weak transcription Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14414200-14416000	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr7:14414200-14416800	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr7:14414400-14416000	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr7:14415800-14416600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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