The 2.0 version of rSNPBase

Variant report

Variant rs17777710
Chromosome Location chr10:52093097-52093098
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:52067400-52093600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr10:52071000-52102400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr10:52071000-52102600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr10:52071200-52093400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr10:52071200-52093800 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr10:52071200-52094000 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr10:52071200-52094200 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr10:52071200-52095800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr10:52071200-52103000 Weak transcription Fetal Intestine Large intestine
10 chr10:52071200-52103200 Weak transcription Thymus Thymus
11 chr10:52071200-52103400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr10:52071200-52103400 Weak transcription Esophagus oesophagus
13 chr10:52073000-52094200 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr10:52073000-52102800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr10:52076400-52103200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr10:52080600-52102600 Weak transcription Lung lung
17 chr10:52082000-52094200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr10:52084000-52103200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr10:52084400-52103400 Weak transcription Spleen Spleen
20 chr10:52084600-52093400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr10:52085800-52094200 Weak transcription Primary B cells from cord blood blood
22 chr10:52085800-52094800 Weak transcription Liver Liver
23 chr10:52085800-52095800 Weak transcription Primary B cells from peripheral blood blood
24 chr10:52085800-52095800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr10:52085800-52102800 Weak transcription Primary T cells fromperipheralblood blood
26 chr10:52085800-52103400 Weak transcription Pancreas Pancrea
27 chr10:52087000-52094000 Weak transcription Fetal Kidney kidney
28 chr10:52087000-52098800 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr10:52087000-52099400 Weak transcription Brain Substantia Nigra brain
30 chr10:52087000-52102400 Weak transcription Brain Cingulate Gyrus brain
31 chr10:52087000-52102600 Weak transcription Fetal Muscle Trunk muscle
32 chr10:52087000-52103200 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr10:52087000-52103400 Weak transcription Aorta Aorta
34 chr10:52087000-52105800 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr10:52087000-52106800 Weak transcription Brain Angular Gyrus brain
36 chr10:52087200-52094000 Weak transcription Placenta Placenta
37 chr10:52087200-52095000 Weak transcription Brain Hippocampus Middle brain
38 chr10:52087200-52099600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr10:52087200-52102400 Weak transcription Colon Smooth Muscle Colon
40 chr10:52087200-52102600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr10:52087200-52102600 Weak transcription Right Ventricle heart
42 chr10:52087200-52102600 Weak transcription Stomach Smooth Muscle stomach
43 chr10:52087200-52103200 Weak transcription Fetal Stomach stomach
44 chr10:52087200-52107400 Weak transcription Rectal Smooth Muscle rectum
45 chr10:52087400-52094000 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr10:52087400-52094200 Weak transcription A549 lung
47 chr10:52087400-52094600 Weak transcription Right Atrium heart
48 chr10:52087400-52099000 Weak transcription Fetal Muscle Leg muscle
49 chr10:52087400-52099200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr10:52087400-52099200 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015