Variant report

Variant rs1778629
Chromosome Location chr1:145061733-145061734
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145047600-145065800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:145055800-145064000 Weak transcription Colon Smooth Muscle Colon
3 chr1:145056800-145062400 Weak transcription Fetal Brain Male brain
4 chr1:145057800-145062200 Enhancers Brain Germinal Matrix brain
5 chr1:145057800-145064600 Weak transcription NHLF lung
6 chr1:145058000-145062400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:145058000-145064600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:145059400-145061800 Weak transcription Psoas Muscle Psoas
9 chr1:145059400-145065400 Weak transcription Muscle Satellite Cultured Cells --
10 chr1:145059600-145061800 Weak transcription NHDF-Ad bronchial
11 chr1:145059600-145065600 Weak transcription Osteobl bone
12 chr1:145060200-145061800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:145060200-145062000 Weak transcription Aorta Aorta
14 chr1:145060200-145062000 Weak transcription Fetal Muscle Leg muscle
15 chr1:145060600-145062000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:145061000-145062000 Weak transcription Pancreas Pancrea
17 chr1:145061000-145062000 Weak transcription K562 blood
18 chr1:145061000-145062200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:145061000-145063800 Weak transcription Brain Substantia Nigra brain
20 chr1:145061000-145065600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:145061000-145068200 Weak transcription Brain Angular Gyrus brain
22 chr1:145061000-145071200 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:145061400-145062200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:145061600-145062600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr1:145061600-145062600 Bivalent Enhancer HepG2 liver

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