Variant report

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10457048	0.89[AFR][1000 genomes]
rs10457747	0.89[AFR][1000 genomes]
rs11155292	0.89[AFR][1000 genomes]
rs12189815	0.89[AFR][1000 genomes]
rs12195895	0.89[AFR][1000 genomes]
rs12197703	0.89[AFR][1000 genomes]
rs12199599	0.89[AFR][1000 genomes]
rs12200633	0.89[AFR][1000 genomes]
rs12205775	0.89[AFR][1000 genomes]
rs12212973	0.89[AFR][1000 genomes]
rs12525791	0.89[AFR][1000 genomes]
rs12525816	1.00[YRI][hapmap];0.89[AFR][1000 genomes]
rs12527382	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12529382	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1345992	0.89[AFR][1000 genomes]
rs1424931	0.89[AFR][1000 genomes]
rs1424934	0.89[AFR][1000 genomes]
rs1424936	0.89[AFR][1000 genomes]
rs17072398	0.84[CEU][hapmap]
rs17072414	0.84[CEU][hapmap];1.00[CHD][hapmap]
rs17445591	1.00[CHD][hapmap]
rs17530287	0.84[CEU][hapmap];1.00[CHD][hapmap]
rs1834268	0.89[AFR][1000 genomes]
rs223593	0.89[AFR][1000 genomes]
rs223594	0.89[AFR][1000 genomes]
rs223595	0.82[AFR][1000 genomes]
rs223597	0.89[AFR][1000 genomes]
rs223598	0.89[AFR][1000 genomes]
rs223600	0.89[AFR][1000 genomes]
rs223601	0.89[AFR][1000 genomes]
rs223602	0.89[AFR][1000 genomes]
rs223610	0.82[AFR][1000 genomes]
rs62430899	0.86[AFR][1000 genomes]
rs62430900	0.89[AFR][1000 genomes]
rs62430901	0.89[AFR][1000 genomes]
rs62430902	0.89[AFR][1000 genomes]
rs6908200	0.89[AFR][1000 genomes]
rs6937320	0.89[AFR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:143690000-143692200	Enhancers	GM12878-XiMat	blood
3	chr6:143690400-143692000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search: