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Variant report
Variant
rs17834917
Chromosome Location
chr14:63288592-63288593
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
No data
No data
No data
No data
Extended variants information (count: 8 )
Associated traits (count: 1 )
rSNPs within LD-proxies of this variant (count:7)
rs_ID
r
2
[population]
rs10483756
0.90[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap]
rs11158452
0.89[JPT][hapmap]
rs12897538
0.90[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap]
rs2171876
0.81[CEU][hapmap];1.00[JPT][hapmap]
rs36107257
0.83[EUR][1000 genomes]
rs7493979
0.81[CEU][hapmap];0.88[JPT][hapmap]
rs961066
0.82[CEU][hapmap]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv902015
chr14:63261862-63356253
Enhancers Weak transcription ZNF genes & repeats Strong transcription
Chromatin interactive region
n/a
inside rSNPs
diseases
mRNA abundance (count:1)
SNP
Gene
Cis/trans
Tissue
Source
rs17834917
PRSS21
trans
lymphoblastoid
seeQTL
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links