Variant report

Variant	rs2171876
Chromosome Location	chr14:63244937-63244938
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1021346	0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10483756	1.00[JPT][hapmap]
rs11158452	0.90[CHB][hapmap];0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs12433281	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12891322	0.88[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12891982	0.83[AMR][1000 genomes]
rs12893269	0.80[EUR][1000 genomes]
rs12897538	1.00[JPT][hapmap]
rs17834917	0.81[CEU][hapmap];1.00[JPT][hapmap]
rs35679534	0.93[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs56397364	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7493979	1.00[CEU][hapmap];0.90[CHB][hapmap];0.88[JPT][hapmap];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs961066	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63227200-63246400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:63233200-63248800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr14:63242200-63245000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr14:63244400-63246600	Enhancers	Hela-S3	cervix
5	chr14:63244800-63246000	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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