Variant report

Variant	rs17836254
Chromosome Location	chr14:80115240-80115241
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs12147614	1.00[LWK][hapmap]

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045241	chr14:79885361-80734201	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv1039622	chr14:79908702-80266601	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv869542	chr14:80009619-80118315	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv511536	chr14:80098883-80115560	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv3359313	chr14:80101248-80115879	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
6	nsv1370	chr14:80103510-80121890	Active TSS Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
7	esv990270	chr14:80105013-80115340	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases
8	esv3515654	chr14:80105199-80116147	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
9	esv3515649	chr14:80105549-80116047	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
10	nsv820296	chr14:80105679-80115419	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
11	esv3530291	chr14:80105821-80115300	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
12	esv3515657	chr14:80106078-80115365	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
13	nsv512366	chr14:80106136-80115439	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
14	nsv565261	chr14:80106929-80115240	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
15	nsv565280	chr14:80109778-80115240	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
16	esv3419610	chr14:80112199-80116597	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv33123	chr14:80115095-80115824	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80113200-80135400	Weak transcription	Stomach Smooth Muscle	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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