Variant report

Variant rs17840009
Chromosome Location chr6:30823122-30823123
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:12 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30816200-30824600 Weak transcription Fetal Kidney kidney
2 chr6:30820600-30823600 Weak transcription H1 Cell Line embryonic stem cell
3 chr6:30820600-30824800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr6:30820600-30825000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr6:30821600-30825000 Enhancers Placenta Placenta
6 chr6:30822400-30823200 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr6:30822400-30823600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr6:30822400-30823800 Enhancers H9 Cell Line embryonic stem cell
9 chr6:30822800-30823200 Weak transcription Placenta Amnion Placenta Amnion
10 chr6:30822800-30823200 Enhancers HepG2 liver
11 chr6:30822800-30823400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr6:30822800-30825200 Enhancers Fetal Intestine Large intestine

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