Variant report

Variant rs17842654
Chromosome Location chr2:110861279-110861280
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110856200-110862400 Enhancers Left Ventricle heart
2 chr2:110856400-110861600 Enhancers Fetal Muscle Leg muscle
3 chr2:110856400-110861600 Enhancers HUVEC blood vessel
4 chr2:110856400-110863200 Enhancers Lung lung
5 chr2:110856600-110861400 Enhancers Adipose Nuclei Adipose
6 chr2:110856600-110865800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr2:110857200-110863200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:110857400-110863400 Weak transcription Aorta Aorta
9 chr2:110857400-110864000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:110857800-110861600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr2:110858000-110865000 Genic enhancers Fetal Intestine Small intestine
12 chr2:110858200-110863800 Enhancers Sigmoid Colon Sigmoid Colon
13 chr2:110858200-110865600 Enhancers Stomach Mucosa stomach
14 chr2:110858400-110861400 Enhancers Pancreas Pancrea
15 chr2:110859000-110862800 Weak transcription Gastric stomach
16 chr2:110859200-110861600 Enhancers Duodenum Mucosa Duodenum
17 chr2:110859400-110863000 Weak transcription Primary hematopoietic stem cells blood
18 chr2:110859600-110862800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr2:110859600-110863800 Enhancers Colonic Mucosa Colon
20 chr2:110859600-110865600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr2:110859800-110861400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr2:110859800-110862200 Enhancers HepG2 liver
23 chr2:110859800-110862800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr2:110859800-110863000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr2:110859800-110863000 Weak transcription Rectal Smooth Muscle rectum
26 chr2:110859800-110863200 Enhancers Rectal Mucosa Donor 31 rectum
27 chr2:110860000-110861400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr2:110860000-110862600 Enhancers Rectal Mucosa Donor 29 rectum
29 chr2:110860000-110863200 Weak transcription Fetal Thymus thymus
30 chr2:110860000-110863200 Genic enhancers NHEK skin
31 chr2:110860000-110863600 Enhancers NH-A brain
32 chr2:110860000-110863800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr2:110860000-110865400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:110860000-110865400 Enhancers Muscle Satellite Cultured Cells --
35 chr2:110860000-110871600 Weak transcription Right Atrium heart
36 chr2:110860200-110861600 Enhancers Skeletal Muscle Male skeletal muscle
37 chr2:110860200-110862800 Enhancers Hela-S3 cervix
38 chr2:110860200-110863000 Weak transcription HSMMtube muscle
39 chr2:110860400-110862200 Weak transcription Placenta Amnion Placenta Amnion
40 chr2:110860600-110861800 Genic enhancers Esophagus oesophagus
41 chr2:110860600-110862400 Weak transcription HSMM muscle
42 chr2:110860600-110862400 Weak transcription Osteobl bone
43 chr2:110860600-110862800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:110860600-110862800 Weak transcription NHDF-Ad bronchial
45 chr2:110860600-110863000 Weak transcription Fetal Lung lung
46 chr2:110860600-110863200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr2:110860600-110863200 Genic enhancers HMEC breast
48 chr2:110860600-110864800 Weak transcription Right Ventricle heart
49 chr2:110860800-110862200 Weak transcription Small Intestine intestine
50 chr2:110860800-110862200 Weak transcription NHLF lung

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