Variant report

Variant rs17842060
Chromosome Location chr2:110896037-110896038
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110874800-110900200 Weak transcription Psoas Muscle Psoas
2 chr2:110877200-110961600 Weak transcription Colon Smooth Muscle Colon
3 chr2:110878600-110920000 Weak transcription Fetal Lung lung
4 chr2:110884800-110906600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:110884800-110910200 Weak transcription Brain Substantia Nigra brain
6 chr2:110885000-110905200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr2:110885000-110915000 Weak transcription Brain Angular Gyrus brain
8 chr2:110885000-110962000 Weak transcription Left Ventricle heart
9 chr2:110885400-110903200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr2:110885400-110907000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:110886400-110912400 Weak transcription Fetal Stomach stomach
12 chr2:110886600-110907800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr2:110887400-110907000 Weak transcription Aorta Aorta
14 chr2:110887800-110901200 Weak transcription Stomach Smooth Muscle stomach
15 chr2:110888600-110901200 Weak transcription Ovary ovary
16 chr2:110888800-110896200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:110892400-110900400 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr2:110892400-110931200 Weak transcription Brain Cingulate Gyrus brain
19 chr2:110892400-110961600 Weak transcription Brain Hippocampus Middle brain
20 chr2:110892800-110901400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr2:110894600-110912400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr2:110896000-110896200 ZNF genes & repeats Brain Anterior Caudate brain
23 chr2:110896000-110896400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr2:110896000-110896400 Enhancers HUVEC blood vessel
25 chr2:110896000-110896400 Enhancers NHEK skin
26 chr2:110896000-110896600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
27 chr2:110896000-110896600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:110896000-110898800 Strong transcription Skeletal Muscle Male skeletal muscle
29 chr2:110896000-110908000 Strong transcription Skeletal Muscle Female skeletal muscle

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