Variant report

Variant	rs9752730
Chromosome Location	chr2:110873440-110873441
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr2:110873380-110873630	AoAF	blood vessel:	n/a	chr2:110873567-110873585 chr2:110873570-110873583
2	SIN3AK20	chr2:110873128-110873625	A549	lung:	n/a	n/a
3	MAX	chr2:110871137-110874664	A549	lung:	n/a	chr2:110873218-110873228 chr2:110873113-110873123 chr2:110873802-110873811 chr2:110873802-110873812 chr2:110872674-110872683 chr2:110873803-110873810
4	EP300	chr2:110873179-110873774	ECC-1	luminal epithelium:	n/a	n/a
5	POLR2A	chr2:110872853-110874242	A549	lung:	n/a	n/a
6	MAX	chr2:110873101-110874371	MCF-7	breast:	n/a	chr2:110873218-110873228 chr2:110873113-110873123 chr2:110873802-110873811 chr2:110873802-110873812 chr2:110873803-110873810
7	POLR2A	chr2:110872854-110873637	A549	lung:	n/a	n/a
8	MAX	chr2:110873070-110873694	MCF-7	breast:	n/a	chr2:110873218-110873228 chr2:110873113-110873123
9	ZBTB7A	chr2:110872833-110873747	ECC-1	luminal epithelium:	n/a	n/a
10	CTBP2	chr2:110872950-110874582	H1-hESC	embryonic stem cell:	n/a	n/a
11	MAX	chr2:110873171-110873821	H1-hESC	embryonic stem cell:	n/a	chr2:110873218-110873228 chr2:110873802-110873811 chr2:110873802-110873812 chr2:110873803-110873810
12	MYC	chr2:110873248-110873465	MCF-7	breast:	n/a	n/a
13	ESR1	chr2:110873129-110873621	ECC-1	luminal epithelium:	n/a	n/a
14	E2F6	chr2:110873117-110874182	H1-hESC	embryonic stem cell:	n/a	chr2:110873569-110873578
15	POLR2A	chr2:110873264-110873467	MCF-7	breast:	n/a	n/a
16	MYC	chr2:110873367-110873533	MCF10A-Er-Src	breast:	n/a	n/a
17	E2F4	chr2:110873393-110873484	MCF10A-Er-Src	breast:	n/a	n/a
18	ZNF384	chr2:110873365-110873617	K562	blood:	n/a	n/a
19	ZNF143	chr2:110872957-110873574	H1-hESC	embryonic stem cell:	n/a	n/a
20	POLR2A	chr2:110873145-110873569	HUVEC	blood vessel:	n/a	n/a
21	TCF12	chr2:110871165-110874758	A549	lung:	n/a	chr2:110871639-110871646 chr2:110874420-110874430 chr2:110873666-110873674
22	SIN3AK20	chr2:110873062-110873627	PANC-1	pancreas:	n/a	n/a
23	HDAC2	chr2:110873194-110873730	MCF-7	breast:	n/a	chr2:110873468-110873482 chr2:110873467-110873481 chr2:110873466-110873480 chr2:110873469-110873483 chr2:110873470-110873484 chr2:110873404-110873413
24	NFIC	chr2:110873180-110874479	ECC-1	luminal epithelium:	n/a	n/a
25	NFIC	chr2:110873096-110873840	ECC-1	luminal epithelium:	n/a	n/a
26	CTCF	chr2:110873400-110873550	Caco-2	colon:	n/a	n/a
27	POLR2A	chr2:110873170-110873695	ECC-1	luminal epithelium:	n/a	n/a
28	MAX	chr2:110873167-110873969	H1-hESC	embryonic stem cell:	n/a	chr2:110873218-110873228 chr2:110873802-110873811 chr2:110873802-110873812 chr2:110873803-110873810
29	REST	chr2:110873244-110874295	A549	lung:	n/a	chr2:110873927-110873936 chr2:110873522-110873542 chr2:110873791-110873804 chr2:110873582-110873589 chr2:110874018-110874038
30	E2F6	chr2:110873210-110873913	H1-hESC	embryonic stem cell:	n/a	chr2:110873569-110873578
31	TEAD4	chr2:110873187-110873787	ECC-1	luminal epithelium:	n/a	n/a
32	POLR2A	chr2:110871186-110874394	HCT-116	colon:	n/a	n/a
33	TCF12	chr2:110873020-110873868	ECC-1	luminal epithelium:	n/a	chr2:110873666-110873674
34	CTCF	chr2:110873300-110873450	SAEC	small airway:	n/a	n/a
35	POLR2A	chr2:110871173-110873797	PANC-1	pancreas:	n/a	n/a
36	POLR2A	chr2:110871542-110873770	HUVEC	blood vessel:	n/a	n/a
37	CTCF	chr2:110873400-110873550	AoAF	blood vessel:	n/a	n/a
38	FOSL2	chr2:110872908-110873649	A549	lung:	n/a	n/a
39	POLR2A	chr2:110871251-110874331	HCT-116	colon:	n/a	n/a
40	TAF1	chr2:110873173-110873738	ECC-1	luminal epithelium:	n/a	n/a
41	SP1	chr2:110872852-110874366	A549	lung:	n/a	n/a
42	POLR2A	chr2:110873179-110873527	MCF10A-Er-Src	breast:	n/a	n/a
43	CTCF	chr2:110873135-110875151	A549	lung:	n/a	chr2:110873567-110873585 chr2:110873950-110873963 chr2:110874132-110874145 chr2:110874412-110874430 chr2:110873570-110873583 chr2:110874414-110874427
44	SRF	chr2:110873100-110873679	ECC-1	luminal epithelium:	n/a	chr2:110873113-110873123
45	MAX	chr2:110872570-110874321	A549	lung:	n/a	chr2:110873218-110873228 chr2:110873113-110873123 chr2:110873802-110873811 chr2:110873802-110873812 chr2:110872674-110872683 chr2:110873803-110873810
46	TCF7L2	chr2:110871675-110873638	HCT-116	colon:	n/a	chr2:110872715-110872725
47	GATA3	chr2:110873194-110873852	MCF-7	breast:	n/a	n/a
48	CTCF	chr2:110873158-110874502	SK-N-SH	brain:	n/a	chr2:110873567-110873585 chr2:110873950-110873963 chr2:110874132-110874145 chr2:110874412-110874430 chr2:110873570-110873583 chr2:110874414-110874427
49	TCF7L2	chr2:110873348-110873655	PANC-1	pancreas:	n/a	n/a
50	CREB1	chr2:110873192-110873839	A549	lung:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:110873394-110873444	AG09319	gingival:	n/a
2	chr2:110873396-110873446	ECC-1	luminal epithelium:	n/a
3	chr2:110873396-110873446	Hepatocyte	liver:	n/a
4	chr2:110873394-110873444	ProgFib	skin:	n/a
5	chr2:110873396-110873446	GM06990	blood:	n/a
6	chr2:110873396-110873446	AoSMC	blood vessel:	n/a
7	chr2:110873394-110873444	PANC-1	pancreas:	n/a
8	chr2:110873394-110873444	U87	brain:	n/a
9	chr2:110873394-110873444	HEK293	kidney:	embryo
10	chr2:110873394-110873444	HL-60	blood:	n/a
11	chr2:110873394-110873444	HPAEpiC	pulmonary alveolar:	n/a
12	chr2:110873394-110873444	AoSMC	blood vessel:	n/a
13	chr2:110873396-110873446	HCPEpiC	choroid plexus:	n/a
14	chr2:110873396-110873446	NT2-D1	testis:	n/a
15	chr2:110873396-110873446	AG09319	gingival:	n/a
16	chr2:110873396-110873446	IMR90	lung:	fetal
17	chr2:110873396-110873446	PrEC	prostate:	n/a
18	chr2:110873396-110873446	CMK	blood:	n/a
19	chr2:110873394-110873444	Jurkat	blood:	n/a
20	chr2:110873394-110873444	A549	lung:	n/a
21	chr2:110873396-110873446	AG10803	skin:	n/a
22	chr2:110873396-110873446	RPTEC	kidney:	n/a
23	chr2:110873394-110873444	PFSK-1	brain:	n/a
24	chr2:110873394-110873444	HCPEpiC	choroid plexus:	n/a
25	chr2:110873396-110873446	HEEpiC	esophagus:	n/a
26	chr2:110873394-110873444	NHDF-neo	bronchial:	n/a
27	chr2:110873396-110873446	NHBE	bronchial:	n/a
28	chr2:110873396-110873446	HAEpiC	amniotic membrane:	n/a
29	chr2:110873396-110873446	HCT-116	colon:	n/a
30	chr2:110873396-110873446	HRCEpiC	kidney:	n/a
31	chr2:110873394-110873444	GM19239	blood:	n/a
32	chr2:110873396-110873446	GM12878	blood:	n/a
33	chr2:110873394-110873444	SK-N-SH	brain:	n/a
34	chr2:110873396-110873446	Caco-2	colon:	n/a
35	chr2:110873394-110873444	SK-N-SH_RA	brain:	n/a
36	chr2:110873394-110873444	AG10803	skin:	n/a
37	chr2:110873394-110873444	MCF-7	breast:	n/a
38	chr2:110873394-110873444	NB4	blood:	n/a
39	chr2:110873394-110873444	HEEpiC	esophagus:	n/a
40	chr2:110873396-110873446	HUVEC	blood vessel:	n/a
41	chr2:110873396-110873446	Jurkat	blood:	n/a
42	chr2:110873394-110873444	Caco-2	colon:	n/a
43	chr2:110873394-110873444	HRPEpiC	eye:	n/a
44	chr2:110873396-110873446	HCF	heart:	n/a
45	chr2:110873394-110873444	GM12892	blood:	n/a
46	chr2:110873394-110873444	HRE	kidney:	n/a
47	chr2:110873396-110873446	SKMC	muscle:	n/a
48	chr2:110873396-110873446	U87	brain:	n/a
49	chr2:110873396-110873446	NH-A	brain:	n/a
50	chr2:110873396-110873446	K562	blood:	n/a

Variant related genes	Relation type
MALL	TF binding region
MALL	CpG island

Extended variants
information (count: 323 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs11885213	0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11888587	0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11895254	1.00[ASW][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11900291	0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs13394313	1.00[MEX][hapmap]
rs1509419	1.00[MEX][hapmap]
rs17162349	1.00[ASW][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.94[YRI][hapmap];0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17162360	0.94[YRI][hapmap];0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17842060	0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17842648	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17842653	1.00[MEX][hapmap]
rs17842667	0.94[YRI][hapmap];0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17842669	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17842679	0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17842680	1.00[ASW][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17842686	1.00[ASW][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs55675209	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs55923269	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs55984257	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs56249781	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs56313926	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs56746186	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs56798985	0.85[AMR][1000 genomes]
rs57345619	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs60498269	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs60598809	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954604	1.00[AMR][1000 genomes]
rs73954607	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73954608	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73954611	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954612	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954613	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954615	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954616	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954618	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954622	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954623	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954627	0.85[AFR][1000 genomes]
rs73954634	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954636	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954637	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954638	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954640	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954643	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73954644	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7424255	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7572483	1.00[ASW][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.94[YRI][hapmap];0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7601550	0.94[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7601685	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs979376	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:273 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011456	chr2:110290958-110980402	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
2	nsv535861	chr2:110290958-110980402	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
3	nsv491837	chr2:110381297-110964737	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
4	nsv999552	chr2:110396395-110978224	Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
5	esv2751812	chr2:110457214-110980346	Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
6	nsv1011653	chr2:110461521-110978224	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
7	nsv874782	chr2:110463288-111334482	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
8	nsv874783	chr2:110498943-110886142	Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
9	nsv1013901	chr2:110501500-110983669	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
10	nsv1003103	chr2:110504334-111084885	Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
11	nsv874787	chr2:110524250-111334482	Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
12	esv2757824	chr2:110693356-111123649	Strong transcription Genic enhancers Weak transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
13	esv2759082	chr2:110693356-111123649	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
14	nsv532271	chr2:110694195-111209736	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
15	nsv582654	chr2:110695564-110983320	Flanking Bivalent TSS/Enh Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
16	nsv917407	chr2:110704031-110983669	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
17	nsv918119	chr2:110704031-111084885	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
18	nsv998768	chr2:110704032-110973315	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
19	nsv1010477	chr2:110704032-110983669	Bivalent Enhancer Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
20	nsv1003206	chr2:110704032-111066273	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
21	nsv1010763	chr2:110704032-111084885	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
22	esv2763637	chr2:110704032-111169128	ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	44 gene(s)	inside rSNPs	diseases
23	nsv1010870	chr2:110704032-111400650	Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
24	nsv874788	chr2:110706146-111334482	Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
25	nsv1011659	chr2:110710762-110983669	Active TSS Enhancers Strong transcription Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
26	nsv998349	chr2:110710762-111084885	Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
27	nsv1005578	chr2:110717078-111084885	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
28	nsv874790	chr2:110727715-111334482	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
29	esv2830158	chr2:110727715-111419426	Enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
30	nsv994984	chr2:110732632-110964737	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
31	nsv869158	chr2:110732632-111334482	Weak transcription Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
32	nsv915752	chr2:110732649-110964775	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
33	nsv874793	chr2:110732676-111334482	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
34	nsv834329	chr2:110733609-110892184	Bivalent Enhancer Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
35	nsv1008374	chr2:110768230-111084885	Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
36	nsv874794	chr2:110772440-111334482	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
37	nsv917668	chr2:110783035-110981045	Enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
38	nsv918099	chr2:110783035-111369031	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
39	nsv529084	chr2:110783036-110964878	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA	10 gene(s)	inside rSNPs	diseases
40	nsv1067566	chr2:110783236-110964737	Weak transcription Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA	10 gene(s)	inside rSNPs	diseases
41	nsv491906	chr2:110783236-110964737	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA	10 gene(s)	inside rSNPs	diseases
42	nsv529799	chr2:110783236-111128847	ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
43	nsv917042	chr2:110783251-110964775	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	10 gene(s)	inside rSNPs	diseases
44	nsv497911	chr2:110783251-111079065	Weak transcription Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
45	nsv533709	chr2:110783258-111334482	Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
46	nsv874795	chr2:110790106-111334482	Enhancers Weak transcription Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
47	nsv582656	chr2:110796252-110983050	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
48	nsv874796	chr2:110796252-111334482	Bivalent Enhancer Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
49	nsv874798	chr2:110804164-111139869	Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
50	nsv874797	chr2:110804164-111334482	Flanking Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:90 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:110869600-110873600	Active TSS	Duodenum Mucosa	Duodenum
2	chr2:110871000-110873600	Active TSS	A549	lung
3	chr2:110871400-110874400	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
4	chr2:110871600-110873600	Active TSS	Right Atrium	heart
5	chr2:110871600-110873800	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
6	chr2:110871600-110874200	Flanking Bivalent TSS/Enh	Adipose Nuclei	Adipose
7	chr2:110871800-110873600	Active TSS	Esophagus	oesophagus
8	chr2:110871800-110873600	Active TSS	Right Ventricle	heart
9	chr2:110872000-110873600	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr2:110872000-110873600	Bivalent/Poised TSS	Fetal Intestine Large	intestine
11	chr2:110872000-110873800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
12	chr2:110872200-110873600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr2:110872200-110873600	Bivalent/Poised TSS	Fetal Intestine Small	intestine
14	chr2:110872200-110873600	Bivalent/Poised TSS	Fetal Stomach	stomach
15	chr2:110872200-110873600	Active TSS	NHEK	skin
16	chr2:110872400-110873600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr2:110872600-110873600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
18	chr2:110872600-110873600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr2:110872600-110873600	Bivalent/Poised TSS	Brain Anterior Caudate	brain
20	chr2:110872600-110873600	Bivalent/Poised TSS	Stomach Mucosa	stomach
21	chr2:110872600-110873800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
22	chr2:110872600-110873800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
23	chr2:110872600-110874000	Bivalent/Poised TSS	Colon Smooth Muscle	Colon
24	chr2:110872600-110878200	Weak transcription	Hela-S3	cervix
25	chr2:110872800-110873600	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
26	chr2:110872800-110873600	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr2:110872800-110873600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
28	chr2:110872800-110873600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
29	chr2:110872800-110873600	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr2:110872800-110873600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr2:110872800-110873600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
32	chr2:110872800-110873600	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
33	chr2:110872800-110873600	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
34	chr2:110872800-110873600	Active TSS	Pancreatic Islets	Pancreatic Islet
35	chr2:110872800-110873600	Flanking Active TSS	Pancreas	Pancrea
36	chr2:110872800-110873800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
37	chr2:110872800-110873800	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr2:110872800-110873800	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
39	chr2:110872800-110874000	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
40	chr2:110872800-110874000	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr2:110872800-110874000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr2:110872800-110874000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr2:110872800-110874000	Bivalent Enhancer	Fetal Brain Male	brain
44	chr2:110872800-110874200	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
45	chr2:110873000-110873600	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr2:110873000-110873600	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
47	chr2:110873000-110873600	Flanking Active TSS	Primary hematopoietic stem cells	blood
48	chr2:110873000-110873600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr2:110873000-110873600	Active TSS	Aorta	Aorta
50	chr2:110873000-110873600	Bivalent/Poised TSS	Fetal Brain Female	brain

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