Variant report

Variant rs73954607
Chromosome Location chr2:110873121-110873122
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110869600-110873600 Active TSS Duodenum Mucosa Duodenum
2 chr2:110871000-110873600 Active TSS A549 lung
3 chr2:110871400-110874400 Bivalent/Poised TSS Rectal Smooth Muscle rectum
4 chr2:110871600-110873600 Active TSS Right Atrium heart
5 chr2:110871600-110873800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
6 chr2:110871600-110874200 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
7 chr2:110871800-110873200 Active TSS Left Ventricle heart
8 chr2:110871800-110873600 Active TSS Esophagus oesophagus
9 chr2:110871800-110873600 Active TSS Right Ventricle heart
10 chr2:110872000-110873400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:110872000-110873600 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
12 chr2:110872000-110873600 Bivalent/Poised TSS Fetal Intestine Large intestine
13 chr2:110872000-110873800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
14 chr2:110872200-110873200 Enhancers HepG2 liver
15 chr2:110872200-110873400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
16 chr2:110872200-110873600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr2:110872200-110873600 Bivalent/Poised TSS Fetal Intestine Small intestine
18 chr2:110872200-110873600 Bivalent/Poised TSS Fetal Stomach stomach
19 chr2:110872200-110873600 Active TSS NHEK skin
20 chr2:110872400-110873200 Bivalent/Poised TSS Small Intestine intestine
21 chr2:110872400-110873400 Active TSS NHLF lung
22 chr2:110872400-110873600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:110872600-110873400 Bivalent/Poised TSS NHDF-Ad bronchial
24 chr2:110872600-110873600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
25 chr2:110872600-110873600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:110872600-110873600 Bivalent/Poised TSS Brain Anterior Caudate brain
27 chr2:110872600-110873600 Bivalent/Poised TSS Stomach Mucosa stomach
28 chr2:110872600-110873800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
29 chr2:110872600-110873800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
30 chr2:110872600-110874000 Bivalent/Poised TSS Colon Smooth Muscle Colon
31 chr2:110872600-110878200 Weak transcription Hela-S3 cervix
32 chr2:110872800-110873200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr2:110872800-110873200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
34 chr2:110872800-110873200 Flanking Active TSS Lung lung
35 chr2:110872800-110873400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:110872800-110873400 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
37 chr2:110872800-110873400 Active TSS HMEC breast
38 chr2:110872800-110873400 Active TSS HUVEC blood vessel
39 chr2:110872800-110873600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
40 chr2:110872800-110873600 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:110872800-110873600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
42 chr2:110872800-110873600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
43 chr2:110872800-110873600 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
44 chr2:110872800-110873600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr2:110872800-110873600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
46 chr2:110872800-110873600 Bivalent/Poised TSS Brain Cingulate Gyrus brain
47 chr2:110872800-110873600 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
48 chr2:110872800-110873600 Active TSS Pancreatic Islets Pancreatic Islet
49 chr2:110872800-110873600 Flanking Active TSS Pancreas Pancrea
50 chr2:110872800-110873800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell

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