Variant report

Variant rs17842653
Chromosome Location chr2:110871665-110871666
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110865600-110871800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:110869600-110873600 Active TSS Duodenum Mucosa Duodenum
3 chr2:110871000-110872800 Enhancers Primary hematopoietic stem cells short term culture blood
4 chr2:110871000-110873600 Active TSS A549 lung
5 chr2:110871200-110871800 Weak transcription Pancreas Pancrea
6 chr2:110871200-110872000 Flanking Active TSS Fetal Intestine Large intestine
7 chr2:110871200-110872200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr2:110871200-110872200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:110871200-110872600 Enhancers Hela-S3 cervix
10 chr2:110871200-110872800 Flanking Active TSS HMEC breast
11 chr2:110871200-110872800 Flanking Active TSS HUVEC blood vessel
12 chr2:110871400-110871800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr2:110871400-110871800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
14 chr2:110871400-110871800 Transcr. at gene 5' and 3' NHEK skin
15 chr2:110871400-110872000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:110871400-110872200 Flanking Active TSS HepG2 liver
17 chr2:110871400-110872400 Enhancers Placenta Amnion Placenta Amnion
18 chr2:110871400-110872400 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
19 chr2:110871400-110872800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:110871400-110873000 Enhancers Spleen Spleen
21 chr2:110871400-110874400 Bivalent/Poised TSS Rectal Smooth Muscle rectum
22 chr2:110871600-110871800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
23 chr2:110871600-110871800 Enhancers Muscle Satellite Cultured Cells --
24 chr2:110871600-110871800 Transcr. at gene 5' and 3' Esophagus oesophagus
25 chr2:110871600-110871800 Bivalent/Poised TSS Fetal Lung lung
26 chr2:110871600-110871800 Enhancers Gastric stomach
27 chr2:110871600-110871800 Flanking Active TSS Left Ventricle heart
28 chr2:110871600-110871800 Flanking Active TSS Right Ventricle heart
29 chr2:110871600-110871800 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon
30 chr2:110871600-110872200 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
31 chr2:110871600-110872200 Enhancers NH-A brain
32 chr2:110871600-110872400 Active TSS Lung lung
33 chr2:110871600-110872400 Bivalent Enhancer Stomach Mucosa stomach
34 chr2:110871600-110872800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr2:110871600-110872800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
36 chr2:110871600-110872800 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr2:110871600-110872800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
38 chr2:110871600-110873000 Active TSS Colonic Mucosa Colon
39 chr2:110871600-110873000 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
40 chr2:110871600-110873000 Bivalent/Poised TSS Stomach Smooth Muscle stomach
41 chr2:110871600-110873600 Active TSS Right Atrium heart
42 chr2:110871600-110873800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
43 chr2:110871600-110874200 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose

Quick Search:


  
Input of quick search could be:

what's new

Quick links