Variant report

Variant rs11887633
Chromosome Location chr2:110872252-110872253
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110869600-110873600 Active TSS Duodenum Mucosa Duodenum
2 chr2:110871000-110872800 Enhancers Primary hematopoietic stem cells short term culture blood
3 chr2:110871000-110873600 Active TSS A549 lung
4 chr2:110871200-110872600 Enhancers Hela-S3 cervix
5 chr2:110871200-110872800 Flanking Active TSS HMEC breast
6 chr2:110871200-110872800 Flanking Active TSS HUVEC blood vessel
7 chr2:110871400-110872400 Enhancers Placenta Amnion Placenta Amnion
8 chr2:110871400-110872400 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
9 chr2:110871400-110872800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:110871400-110873000 Enhancers Spleen Spleen
11 chr2:110871400-110874400 Bivalent/Poised TSS Rectal Smooth Muscle rectum
12 chr2:110871600-110872400 Active TSS Lung lung
13 chr2:110871600-110872400 Bivalent Enhancer Stomach Mucosa stomach
14 chr2:110871600-110872800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr2:110871600-110872800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:110871600-110872800 Bivalent Enhancer Fetal Muscle Trunk muscle
17 chr2:110871600-110872800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
18 chr2:110871600-110873000 Active TSS Colonic Mucosa Colon
19 chr2:110871600-110873000 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
20 chr2:110871600-110873000 Bivalent/Poised TSS Stomach Smooth Muscle stomach
21 chr2:110871600-110873600 Active TSS Right Atrium heart
22 chr2:110871600-110873800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
23 chr2:110871600-110874200 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
24 chr2:110871800-110872400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:110871800-110872400 Bivalent Enhancer Fetal Lung lung
26 chr2:110871800-110872800 Enhancers Pancreas Pancrea
27 chr2:110871800-110873000 Enhancers Primary hematopoietic stem cells blood
28 chr2:110871800-110873000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
29 chr2:110871800-110873000 Weak transcription Gastric stomach
30 chr2:110871800-110873200 Active TSS Left Ventricle heart
31 chr2:110871800-110873600 Active TSS Esophagus oesophagus
32 chr2:110871800-110873600 Active TSS Right Ventricle heart
33 chr2:110872000-110872800 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
34 chr2:110872000-110873000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:110872000-110873000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr2:110872000-110873400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr2:110872000-110873600 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
38 chr2:110872000-110873600 Bivalent/Poised TSS Fetal Intestine Large intestine
39 chr2:110872000-110873800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
40 chr2:110872200-110872400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:110872200-110872600 Enhancers Muscle Satellite Cultured Cells --
42 chr2:110872200-110873000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr2:110872200-110873000 Flanking Active TSS NH-A brain
44 chr2:110872200-110873200 Enhancers HepG2 liver
45 chr2:110872200-110873400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
46 chr2:110872200-110873600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr2:110872200-110873600 Bivalent/Poised TSS Fetal Intestine Small intestine
48 chr2:110872200-110873600 Bivalent/Poised TSS Fetal Stomach stomach
49 chr2:110872200-110873600 Active TSS NHEK skin

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