Variant report

Variant rs1509419
Chromosome Location chr2:110902193-110902194
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110877200-110961600 Weak transcription Colon Smooth Muscle Colon
2 chr2:110878600-110920000 Weak transcription Fetal Lung lung
3 chr2:110884800-110906600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:110884800-110910200 Weak transcription Brain Substantia Nigra brain
5 chr2:110885000-110905200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr2:110885000-110915000 Weak transcription Brain Angular Gyrus brain
7 chr2:110885000-110962000 Weak transcription Left Ventricle heart
8 chr2:110885400-110903200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr2:110885400-110907000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:110886400-110912400 Weak transcription Fetal Stomach stomach
11 chr2:110886600-110907800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr2:110887400-110907000 Weak transcription Aorta Aorta
13 chr2:110892400-110931200 Weak transcription Brain Cingulate Gyrus brain
14 chr2:110892400-110961600 Weak transcription Brain Hippocampus Middle brain
15 chr2:110894600-110912400 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr2:110896000-110908000 Strong transcription Skeletal Muscle Female skeletal muscle
17 chr2:110896200-110920000 Weak transcription Brain Anterior Caudate brain
18 chr2:110896400-110907000 Weak transcription Lung lung
19 chr2:110896600-110906400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:110898800-110907400 Weak transcription Fetal Muscle Leg muscle
21 chr2:110900200-110903800 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr2:110900200-110907600 Strong transcription Skeletal Muscle Male skeletal muscle
23 chr2:110900400-110902200 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr2:110900600-110912200 Weak transcription Fetal Brain Male brain
25 chr2:110901000-110902800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr2:110901000-110903800 Enhancers HepG2 liver
27 chr2:110901000-110904000 Weak transcription Fetal Muscle Trunk muscle
28 chr2:110901200-110902400 Strong transcription Stomach Smooth Muscle stomach
29 chr2:110901400-110906600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:110901600-110907000 Weak transcription Esophagus oesophagus
31 chr2:110901800-110906400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:110901800-110920000 Weak transcription Ovary ovary
33 chr2:110901800-110924800 Weak transcription Psoas Muscle Psoas

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