Variant report

Variant rs17842656
Chromosome Location chr2:110857126-110857127
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110852600-110857200 Weak transcription Colonic Mucosa Colon
2 chr2:110852800-110858600 Genic enhancers A549 lung
3 chr2:110853600-110857800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr2:110853600-110858000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr2:110853600-110858000 Strong transcription Fetal Intestine Small intestine
6 chr2:110853600-110858000 Weak transcription NHLF lung
7 chr2:110854600-110860600 Enhancers HMEC breast
8 chr2:110855200-110857400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr2:110855200-110858000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:110855200-110858200 Weak transcription Fetal Lung lung
11 chr2:110855600-110860600 Enhancers Right Ventricle heart
12 chr2:110855800-110857600 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr2:110855800-110858200 Weak transcription Stomach Mucosa stomach
14 chr2:110855800-110858600 Weak transcription Placenta Amnion Placenta Amnion
15 chr2:110856000-110857200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr2:110856200-110862400 Enhancers Left Ventricle heart
17 chr2:110856400-110858200 Strong transcription Fetal Intestine Large intestine
18 chr2:110856400-110860400 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr2:110856400-110860600 Enhancers Esophagus oesophagus
20 chr2:110856400-110861600 Enhancers Fetal Muscle Leg muscle
21 chr2:110856400-110861600 Enhancers HUVEC blood vessel
22 chr2:110856400-110863200 Enhancers Lung lung
23 chr2:110856600-110857400 Enhancers Aorta Aorta
24 chr2:110856600-110857400 Enhancers Right Atrium heart
25 chr2:110856600-110857600 Enhancers Skeletal Muscle Male skeletal muscle
26 chr2:110856600-110857600 Genic enhancers NHEK skin
27 chr2:110856600-110857800 Genic enhancers Duodenum Mucosa Duodenum
28 chr2:110856600-110857800 Enhancers Spleen Spleen
29 chr2:110856600-110858600 Enhancers Rectal Mucosa Donor 31 rectum
30 chr2:110856600-110859600 Enhancers Fetal Heart heart
31 chr2:110856600-110860400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr2:110856600-110861400 Enhancers Adipose Nuclei Adipose
33 chr2:110856600-110865800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:110856800-110857800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:110856800-110858600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr2:110856800-110858600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr2:110856800-110858600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr2:110856800-110858600 Enhancers Hela-S3 cervix

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