Variant report

Variant rs17852687
Chromosome Location chr3:195956827-195956828
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195944200-195964000 Weak transcription H9 Cell Line embryonic stem cell
2 chr3:195945000-195968400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr3:195946600-195965600 Weak transcription H1 Cell Line embryonic stem cell
4 chr3:195946800-195962600 Weak transcription Primary T cells from cord blood blood
5 chr3:195946800-195964200 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr3:195946800-195967400 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr3:195947000-195959000 Weak transcription Dnd41 blood
8 chr3:195947000-195960800 Weak transcription Fetal Intestine Large intestine
9 chr3:195947000-195963800 Weak transcription Brain Cingulate Gyrus brain
10 chr3:195947000-195964000 Weak transcription Colonic Mucosa Colon
11 chr3:195947200-195962000 Weak transcription Fetal Brain Male brain
12 chr3:195947200-195962600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr3:195947200-195962600 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr3:195947400-195958800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr3:195948000-195970400 Strong transcription Liver Liver
16 chr3:195950400-195959800 Weak transcription Duodenum Mucosa Duodenum
17 chr3:195950400-195964400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr3:195952600-195963200 Weak transcription K562 blood
19 chr3:195953200-195963800 Weak transcription Brain Germinal Matrix brain
20 chr3:195953800-195957400 Strong transcription Fetal Intestine Small intestine
21 chr3:195954600-195960000 Weak transcription Fetal Brain Female brain
22 chr3:195954600-195960400 Weak transcription Lung lung
23 chr3:195954600-195962200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr3:195954600-195963800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr3:195954600-195964600 Weak transcription Brain Angular Gyrus brain
26 chr3:195954600-195964800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr3:195954800-195962800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr3:195954800-195963800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr3:195954800-195963800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr3:195954800-195963800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr3:195954800-195964600 Weak transcription NHDF-Ad bronchial
32 chr3:195954800-195968600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr3:195955000-195963000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr3:195955000-195963200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr3:195955000-195963800 Weak transcription Brain Hippocampus Middle brain
36 chr3:195955000-195963800 Weak transcription HMEC breast
37 chr3:195955000-195964000 Weak transcription Fetal Lung lung
38 chr3:195955200-195959600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr3:195955200-195961000 Weak transcription Fetal Muscle Leg muscle
40 chr3:195955200-195963000 Weak transcription Spleen Spleen
41 chr3:195955200-195963200 Weak transcription Stomach Smooth Muscle stomach
42 chr3:195955200-195964200 Weak transcription HSMM muscle
43 chr3:195955400-195963600 Weak transcription Gastric stomach
44 chr3:195955400-195964000 Weak transcription Placenta Amnion Placenta Amnion
45 chr3:195955400-195968400 Weak transcription Pancreas Pancrea
46 chr3:195955600-195959400 Weak transcription HepG2 liver
47 chr3:195955600-195959800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr3:195955600-195962200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr3:195955600-195963000 Weak transcription Left Ventricle heart
50 chr3:195955600-195963600 Weak transcription Right Ventricle heart

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