Variant report

Variant	rs1786645
Chromosome Location	chr11:93485938-93485939
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:93480523..93482520-chr11:93485801..93487709,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs908753	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv898182	chr11:93381845-93637462	Strong transcription Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
3	nsv832232	chr11:93401314-93549438	Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93475200-93497000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr11:93475400-93490800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr11:93475400-93490800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr11:93475600-93490000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr11:93475600-93497000	Weak transcription	NHDF-Ad	bronchial
6	chr11:93475800-93488400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr11:93475800-93488400	Weak transcription	Aorta	Aorta
8	chr11:93476000-93486600	Weak transcription	Primary hematopoietic stem cells	blood
9	chr11:93476000-93486800	Weak transcription	Primary B cells from peripheral blood	blood
10	chr11:93476000-93488400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
11	chr11:93476000-93488400	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr11:93476000-93488400	Weak transcription	Rectal Smooth Muscle	rectum
13	chr11:93476000-93488400	Weak transcription	HSMMtube	muscle
14	chr11:93476000-93490600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr11:93476000-93491400	Weak transcription	Osteobl	bone
16	chr11:93476000-93495600	Weak transcription	HUVEC	blood vessel
17	chr11:93476000-93497000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
18	chr11:93476000-93497200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
19	chr11:93476000-93498800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
20	chr11:93476200-93486800	Weak transcription	Colon Smooth Muscle	Colon
21	chr11:93476200-93488000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr11:93476200-93499800	Weak transcription	NH-A	brain
23	chr11:93476600-93486400	Weak transcription	GM12878-XiMat	blood
24	chr11:93476600-93487200	Weak transcription	Fetal Brain Male	brain
25	chr11:93476600-93488400	Weak transcription	Colonic Mucosa	Colon
26	chr11:93476800-93486800	Weak transcription	Primary T helper cells PMA-I stimulated	--
27	chr11:93477000-93486600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr11:93477000-93487000	Weak transcription	Hela-S3	cervix
29	chr11:93477000-93488400	Weak transcription	Esophagus	oesophagus
30	chr11:93477000-93491200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr11:93477200-93486600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr11:93477200-93486600	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr11:93477200-93486800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr11:93477200-93486800	Weak transcription	Dnd41	blood
35	chr11:93477200-93487200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
36	chr11:93477200-93488000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
37	chr11:93477200-93488400	Weak transcription	Sigmoid Colon	Sigmoid Colon
38	chr11:93477200-93488400	Weak transcription	Spleen	Spleen
39	chr11:93477200-93490800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr11:93477200-93491400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr11:93477200-93491400	Weak transcription	NHLF	lung
42	chr11:93477400-93486600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr11:93477400-93486600	Weak transcription	Fetal Muscle Trunk	muscle
44	chr11:93477600-93486800	Weak transcription	Placenta	Placenta
45	chr11:93478200-93498800	Weak transcription	Fetal Heart	heart
46	chr11:93478400-93488000	Weak transcription	Fetal Lung	lung
47	chr11:93478400-93488400	Weak transcription	Right Ventricle	heart
48	chr11:93478400-93490600	Weak transcription	Psoas Muscle	Psoas
49	chr11:93478600-93486600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr11:93478600-93486800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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