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Variant report
Variant
rs17866916
Chromosome Location
chr7:127059972-127059973
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:4)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:4 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:127028023..127032462-chr7:127058238..127063116,5
K562
blood:
2
chr7:127028023..127030313-chr7:127059474..127062419,2
K562
blood:
3
chr7:127030962..127032535-chr7:127059904..127062552,3
K562
blood:
4
chr7:127044608..127046451-chr7:127058342..127060584,2
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000048405
Chromatin interaction
Extended variants information (count: 9 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:9)
rs_ID
r
2
[population]
rs17864930
1.00[YRI][hapmap]
rs17865100
1.00[YRI][hapmap]
rs17865103
1.00[YRI][hapmap]
rs17866185
1.00[YRI][hapmap]
rs17869706
0.84[AFR][1000 genomes]
rs6959255
1.00[YRI][hapmap]
rs6959473
1.00[YRI][hapmap]
rs7798749
1.00[YRI][hapmap]
rs9690791
0.80[AFR][1000 genomes]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links