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Variant report
Variant
rs17867852
Chromosome Location
chr7:127060796-127060797
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:3)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:3 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:127028023..127032462-chr7:127058238..127063116,5
K562
blood:
2
chr7:127028023..127030313-chr7:127059474..127062419,2
K562
blood:
3
chr7:127030962..127032535-chr7:127059904..127062552,3
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000048405
Chromatin interaction
Extended variants information (count: 3 )
Associated traits (count: 3 )
rSNPs within LD-proxies of this variant (count:3)
rs_ID
r
2
[population]
rs11975345
0.82[JPT][hapmap]
rs6949899
0.82[JPT][hapmap]
rs6967546
0.82[JPT][hapmap]
mRNA abundance (count:3)
SNP
Gene
Cis/trans
Tissue
Source
rs17867852
ASB15
cis
cerebellum
SCAN
rs17867852
KCP
cis
parietal
SCAN
rs17867852
OPN1SW
cis
parietal
SCAN
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links