Variant report
Variant | rs17869348 |
---|---|
Chromosome Location | chr7:126945013-126945014 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000048405 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs11563401 | 1.00[EUR][1000 genomes] |
rs17864150 | 1.00[JPT][hapmap] |
rs17864970 | 1.00[JPT][hapmap];1.00[EUR][1000 genomes] |
rs17864995 | 0.87[YRI][hapmap] |
rs17865398 | 0.89[YRI][hapmap] |
rs17865431 | 0.87[YRI][hapmap] |
rs17865875 | 1.00[JPT][hapmap];1.00[EUR][1000 genomes] |
rs17866822 | 1.00[JPT][hapmap];1.00[EUR][1000 genomes] |
rs17867074 | 0.89[YRI][hapmap] |
rs17869260 | 1.00[EUR][1000 genomes] |
rs17869283 | 0.89[YRI][hapmap] |
rs17875009 | 1.00[EUR][1000 genomes] |
rs28947796 | 1.00[EUR][1000 genomes] |
rs4731347 | 1.00[JPT][hapmap] |
rs6948167 | 1.00[EUR][1000 genomes] |
rs6967758 | 1.00[JPT][hapmap];1.00[EUR][1000 genomes] |
rs73445355 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv889189 | chr7:126699088-126963028 | Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
No data |