The 2.0 version of rSNPBase

Variant report

Variant rs17883781
Chromosome Location chr11:102209440-102209441
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102188800-102216600 Weak transcription HSMMtube muscle
2 chr11:102189400-102216600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr11:102189400-102216800 Weak transcription Right Ventricle heart
4 chr11:102191200-102216800 Weak transcription Aorta Aorta
5 chr11:102191200-102217400 Weak transcription Esophagus oesophagus
6 chr11:102191600-102216600 Weak transcription Brain Anterior Caudate brain
7 chr11:102191800-102212600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr11:102194600-102212600 Weak transcription Dnd41 blood
9 chr11:102194800-102209800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
10 chr11:102195000-102210400 Weak transcription HMEC breast
11 chr11:102196000-102212200 Weak transcription Hela-S3 cervix
12 chr11:102196600-102209600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr11:102197000-102209800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr11:102198400-102209800 Strong transcription Primary T cells fromperipheralblood blood
15 chr11:102198400-102210600 Strong transcription Primary B cells from peripheral blood blood
16 chr11:102198400-102217400 Weak transcription Gastric stomach
17 chr11:102200000-102210400 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr11:102200000-102216600 Weak transcription Brain Cingulate Gyrus brain
19 chr11:102201400-102209600 Strong transcription GM12878-XiMat blood
20 chr11:102201600-102216600 Weak transcription Colonic Mucosa Colon
21 chr11:102202000-102212400 Weak transcription HSMM muscle
22 chr11:102203200-102212200 Weak transcription Stomach Mucosa stomach
23 chr11:102203200-102216000 Weak transcription Rectal Smooth Muscle rectum
24 chr11:102203600-102210400 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr11:102203600-102210400 Weak transcription Muscle Satellite Cultured Cells --
26 chr11:102203600-102212200 Weak transcription A549 lung
27 chr11:102203600-102212400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr11:102203600-102212600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr11:102203600-102214600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr11:102203600-102216600 Weak transcription Adipose Nuclei Adipose
31 chr11:102203600-102216600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr11:102203600-102217400 Weak transcription Spleen Spleen
33 chr11:102203800-102212200 Weak transcription Primary hematopoietic stem cells blood
34 chr11:102203800-102212200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr11:102204400-102216600 Weak transcription Small Intestine intestine
36 chr11:102204400-102216800 Weak transcription Pancreas Pancrea
37 chr11:102204800-102212600 Weak transcription Thymus Thymus
38 chr11:102205000-102209600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr11:102205400-102210000 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr11:102205400-102210600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr11:102205600-102210000 Strong transcription Fetal Thymus thymus
42 chr11:102205800-102210400 Strong transcription Primary B cells from cord blood blood
43 chr11:102205800-102210600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
44 chr11:102206200-102209800 Strong transcription Sigmoid Colon Sigmoid Colon
45 chr11:102206800-102209600 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr11:102206800-102210000 Strong transcription Primary T helper naive cells from peripheral blood blood
47 chr11:102207000-102209800 Strong transcription Duodenum Smooth Muscle Duodenum
48 chr11:102207000-102212400 Weak transcription NHEK skin
49 chr11:102207200-102216600 Weak transcription Left Ventricle heart
50 chr11:102207600-102209600 Strong transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015