Variant report

Variant	rs1792174
Chromosome Location	chr11:73498933-73498934
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:579)
CpG islands
(count:61)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

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No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TAF1	chr11:73498783-73499319	HepG2	liver:	n/a	n/a
2	USF1	chr11:73498687-73499519	SK-N-SH	brain:	n/a	n/a
3	MYC	chr11:73498775-73499360	Hela-S3	cervix:	n/a	n/a
4	POLR2A	chr11:73498616-73499216	U87	brain:	n/a	n/a
5	MAZ	chr11:73498707-73499448	HepG2	liver:	n/a	n/a
6	TAF1	chr11:73498649-73499379	GM12891	blood:	n/a	n/a
7	CTCF	chr11:73498800-73498950	SK-N-SH_RA	brain:	n/a	n/a
8	SP1	chr11:73498453-73499699	A549	lung:	n/a	chr11:73499260-73499270 chr11:73499260-73499270
9	TCF3	chr11:73498812-73499312	GM12878	blood:	n/a	n/a
10	TEAD4	chr11:73498603-73499491	ECC-1	luminal epithelium:	n/a	n/a
11	TAF7	chr11:73498856-73499137	K562	blood:	n/a	n/a
12	POLR2A	chr11:73498741-73499392	H1-hESC	embryonic stem cell:	n/a	n/a
13	BRCA1	chr11:73498697-73499271	H1-hESC	embryonic stem cell:	n/a	n/a
14	KAP1	chr11:73498631-73499514	HEK293	kidney:	n/a	n/a
15	SIX5	chr11:73498692-73499308	GM12878	blood:	n/a	n/a
16	GABPA	chr11:73498669-73499374	K562	blood:	n/a	n/a
17	GABPA	chr11:73498591-73499500	HL-60	blood:	n/a	n/a
18	NFIC	chr11:73498712-73499461	ECC-1	luminal epithelium:	n/a	n/a
19	MYBL2	chr11:73498381-73499542	HepG2	liver:	n/a	n/a
20	POLR2A	chr11:73498638-73499441	HL-60	blood:	n/a	n/a
21	GABPA	chr11:73498483-73499622	MCF-7	breast:	n/a	n/a
22	USF2	chr11:73498717-73499903	GM12878	blood:	n/a	chr11:73499747-73499758
23	MYC	chr11:73498601-73499531	H1-hESC	embryonic stem cell:	n/a	n/a
24	MAX	chr11:73498582-73499515	H1-hESC	embryonic stem cell:	n/a	n/a
25	EP300	chr11:73498642-73499510	ECC-1	luminal epithelium:	n/a	n/a
26	TCF12	chr11:73498702-73499144	H1-hESC	embryonic stem cell:	n/a	n/a
27	POLR2A	chr11:73498606-73499505	GM12892	blood:	n/a	n/a
28	TAF1	chr11:73498690-73499407	PFSK-1	brain:	n/a	n/a
29	BCLAF1	chr11:73498613-73499207	K562	blood:	n/a	n/a
30	CHD2	chr11:73498740-73499921	Hela-S3	cervix:	n/a	n/a
31	ATF2	chr11:73498618-73499176	GM12878	blood:	n/a	n/a
32	TBL1XR1	chr11:73498725-73499397	K562	blood:	n/a	n/a
33	CHD2	chr11:73498743-73499466	H1-hESC	embryonic stem cell:	n/a	n/a
34	USF1	chr11:73498712-73499443	A549	lung:	n/a	n/a
35	TAF1	chr11:73498704-73499470	H1-neurons	neurons:	n/a	n/a
36	POLR2A	chr11:73498424-73500518	Hela-S3	cervix:	n/a	n/a
37	EP300	chr11:73498734-73499300	HepG2	liver:	n/a	n/a
38	SIN3A	chr11:73498746-73499422	GM12878	blood:	n/a	chr11:73499000-73499011
39	TAF1	chr11:73498557-73499492	H1-hESC	embryonic stem cell:	n/a	n/a
40	POLR2A	chr11:73498717-73499469	GM18526	blood:	n/a	n/a
41	POU2F2	chr11:73498667-73499429	GM12891	blood:	n/a	chr11:73499385-73499392 chr11:73499384-73499393
42	RELA	chr11:73498701-73499521	GM15510	blood:	n/a	n/a
43	REST	chr11:73498672-73499524	PFSK-1	brain:	n/a	n/a
44	RFX5	chr11:73498770-73499348	HepG2	liver:	n/a	n/a
45	POLR2A	chr11:73498754-73499416	Gliobla	brain:	n/a	n/a
46	BCL3	chr11:73498506-73499549	A549	lung:	n/a	n/a
47	HEY1	chr11:73498678-73499488	K562	blood:	n/a	n/a
48	POLR2A	chr11:73498588-73499464	K562	blood:	n/a	n/a
49	YY1	chr11:73498821-73499287	NT2-D1	testis:	n/a	n/a
50	PBX3	chr11:73498695-73499533	SK-N-SH	brain:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:73498894-73498944	LNCaP	prostate:	n/a
2	chr11:73498894-73498944	Hepatocyte	liver:	n/a
3	chr11:73498894-73498944	HRE	kidney:	n/a
4	chr11:73498894-73498944	Caco-2	colon:	n/a
5	chr11:73498894-73498944	IMR90	lung:	fetal
6	chr11:73498894-73498944	HRCEpiC	kidney:	n/a
7	chr11:73498894-73498944	NT2-D1	testis:	n/a
8	chr11:73498894-73498944	NHBE	bronchial:	n/a
9	chr11:73498894-73498944	ECC-1	luminal epithelium:	n/a
10	chr11:73498894-73498944	AG09319	gingival:	n/a
11	chr11:73498894-73498944	GM19239	blood:	n/a
12	chr11:73498894-73498944	SK-N-MC	brain:	n/a
13	chr11:73498894-73498944	HCM	heart:	n/a
14	chr11:73498894-73498944	HCT-116	colon:	n/a
15	chr11:73498894-73498944	HIPEpiC	eye:	n/a
16	chr11:73498894-73498944	HCPEpiC	choroid plexus:	n/a
17	chr11:73498894-73498944	K562	blood:	n/a
18	chr11:73498894-73498944	AG09309	skin:	n/a
19	chr11:73498894-73498944	ProgFib	skin:	n/a
20	chr11:73498894-73498944	MCF10A-Er-Src	breast:	n/a
21	chr11:73498894-73498944	HNPCEpiC	eye:	n/a
22	chr11:73498894-73498944	HEEpiC	esophagus:	n/a
23	chr11:73498894-73498944	A549	lung:	n/a
24	chr11:73498894-73498944	ovcar-3	ovarian:	n/a
25	chr11:73498894-73498944	HepG2	liver:	n/a
26	chr11:73498894-73498944	CMK	blood:	n/a
27	chr11:73498894-73498944	HUVEC	blood vessel:	n/a
28	chr11:73498894-73498944	PFSK-1	brain:	n/a
29	chr11:73498894-73498944	RPTEC	kidney:	n/a
30	chr11:73498894-73498944	GM12891	blood:	n/a
31	chr11:73498894-73498944	HPAEpiC	pulmonary alveolar:	n/a
32	chr11:73498894-73498944	AG04450	lung:	fetal
33	chr11:73498894-73498944	BJ	skin:	n/a
34	chr11:73498894-73498944	SK-N-SH	brain:	n/a
35	chr11:73498894-73498944	SKMC	muscle:	n/a
36	chr11:73498894-73498944	Hela-S3	cervix:	n/a
37	chr11:73498894-73498944	HMEC	breast:	n/a
38	chr11:73498894-73498944	NHDF-neo	bronchial:	n/a
39	chr11:73498894-73498944	SK-N-SH_RA	brain:	n/a
40	chr11:73498894-73498944	MCF-7	breast:	n/a
41	chr11:73498894-73498944	T-47D	breast:	n/a
42	chr11:73498894-73498944	GM06990	blood:	n/a
43	chr11:73498894-73498944	PANC-1	pancreas:	n/a
44	chr11:73498894-73498944	HRPEpiC	eye:	n/a
45	chr11:73498894-73498944	AG04449	skin:	fetal
46	chr11:73498894-73498944	H1-hESC	embryonic stem cell:	embryo
47	chr11:73498894-73498944	BE2_C	brain:	n/a
48	chr11:73498894-73498944	HL-60	blood:	n/a
49	chr11:73498894-73498944	GM12878	blood:	n/a
50	chr11:73498894-73498944	HAEpiC	amniotic membrane:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:73470211..73473572-chr11:73496692..73501846,8	MCF-7	breast:
2	chr11:73470660..73473982-chr11:73497982..73500813,6	MCF-7	breast:
3	chr1:144533729..144534624-chr11:73498785..73499576,2	Hela-S3	cervix:
4	chr11:73469206..73473775-chr11:73494297..73499248,5	K562	blood:
5	chr11:73497934..73501442-chr11:73586433..73589232,4	K562	blood:
6	chr11:73466132..73474322-chr11:73488493..73499248,27	K562	blood:
7	chr11:73087227..73088916-chr11:73498113..73499675,2	K562	blood:
8	chr11:73471807..73472717-chr11:73498745..73499371,2	Hela-S3	cervix:
9	chr11:73497415..73503223-chr11:73585602..73589591,8	K562	blood:
10	chr11:73497005..73500757-chr11:73586552..73589226,3	MCF-7	breast:
11	chr11:73497833..73499954-chr17:57783291..57785568,2	MCF-7	breast:

No data

Variant related genes	Relation type
MRPL48	TF binding region
MRPL48	CpG island
ENSG00000175575	Chromatin interaction
ENSG00000201699	Chromatin interaction
ENSG00000062716	Chromatin interaction
ENSG00000175582	Chromatin interaction
ENSG00000054967	Chromatin interaction
ENSG00000181924	Chromatin interaction
ENSG00000256034	Chromatin interaction
ENSG00000141378	Chromatin interaction

Extended variants
information (count: 83 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:78)

rs_ID	r²[population]
rs10751229	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10793065	0.83[CHB][hapmap];0.86[JPT][hapmap]
rs10793066	0.84[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.81[YRI][hapmap];0.84[EUR][1000 genomes]
rs10793067	0.92[ASW][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];0.87[MEX][hapmap];0.87[YRI][hapmap]
rs10793068	0.82[CHB][hapmap]
rs10793069	0.82[CHB][hapmap]
rs10898931	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs10898935	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[YRI][hapmap];0.80[EUR][1000 genomes]
rs10898936	0.80[EUR][1000 genomes]
rs10898938	0.87[TSI][hapmap];1.00[YRI][hapmap]
rs10898946	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11235861	0.80[EUR][1000 genomes]
rs11235862	0.80[EUR][1000 genomes]
rs11235876	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11235883	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11235884	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11602887	0.81[EUR][1000 genomes]
rs12361691	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12420357	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.80[EUR][1000 genomes]
rs12788426	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1404976	0.81[EUR][1000 genomes]
rs1525749	0.89[GIH][hapmap];0.83[TSI][hapmap]
rs1614987	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1632159	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1670537	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.95[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1670540	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1670543	0.88[CEU][hapmap];0.86[CHB][hapmap];0.84[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.82[ASN][1000 genomes]
rs1670549	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1670557	1.00[ASW][hapmap];0.96[CEU][hapmap];0.86[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1670559	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1670562	0.82[ASN][1000 genomes]
rs1670564	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1670565	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1670570	0.82[ASN][1000 genomes]
rs1670572	0.81[ASN][1000 genomes]
rs1723833	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1723835	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1723843	1.00[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1723848	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1792156	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.95[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1792160	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1792161	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1792165	0.86[CHB][hapmap];0.89[CHD][hapmap];0.82[ASN][1000 genomes]
rs1792166	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1792176	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1792180	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1792183	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1792184	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1792187	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1792193	0.86[CHB][hapmap];0.89[CHD][hapmap];0.81[ASN][1000 genomes]
rs1792198	0.92[ASW][hapmap];0.88[CEU][hapmap];0.86[CHB][hapmap];0.84[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.87[YRI][hapmap];0.82[ASN][1000 genomes]
rs2140893	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2444603	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2444606	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2462621	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2511261	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2511270	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2511271	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2511272	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2512625	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2512628	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2512629	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2515093	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2886816	0.80[AFR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4471449	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4514449	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4548647	0.83[AMR][1000 genomes]
rs4558190	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs612914	0.80[CHB][hapmap]
rs653263	0.85[CHB][hapmap]
rs6592533	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7104603	0.80[EUR][1000 genomes]
rs7119055	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.81[EUR][1000 genomes]
rs7925514	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7933372	0.80[ASN][1000 genomes]
rs7938731	0.80[AFR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7940132	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs868667	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530624	chr11:73114283-73646329	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv492091	chr11:73285970-73844424	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
3	nsv1045149	chr11:73314565-73581908	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
4	nsv530641	chr11:73358393-73638725	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
5	esv3426251	chr11:73461503-73538032	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs1792174	MRPL48	cis	multi-tissue	Pritchard
rs1792174	MRPL48	cis	Whole Blood	GTEx
rs1792174	MRPL48	cis	lymphoblastoid	seeQTL
rs1792174	PLEKHB1	cis	parietal	SCAN
rs1792174	RNF121	cis	cerebellum	SCAN
rs1792174	MRPL48	Cis_1M	lymphoblastoid	RTeQTL
rs1792174	PAAF1	cis	lymphoblastoid	seeQTL
rs1792174	MRPL48	cis	cerebellum	SCAN
rs1792174	PAAF1	cis	Lymphoblastoid	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:73498000-73500000	Active TSS	NHDF-Ad	bronchial
2	chr11:73498200-73499400	Active TSS	Fetal Brain Female	brain
3	chr11:73498200-73499600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr11:73498200-73499600	Active TSS	Fetal Intestine Small	intestine
5	chr11:73498200-73499800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:73498200-73499800	Active TSS	Brain Germinal Matrix	brain
7	chr11:73498200-73499800	Active TSS	Fetal Intestine Large	intestine
8	chr11:73498200-73499800	Active TSS	Pancreatic Islets	Pancreatic Islet
9	chr11:73498200-73499800	Active TSS	Fetal Stomach	stomach
10	chr11:73498200-73499800	Active TSS	Skeletal Muscle Male	skeletal muscle
11	chr11:73498200-73499800	Active TSS	Stomach Smooth Muscle	stomach
12	chr11:73498200-73500000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr11:73498200-73500000	Active TSS	iPS-20b Cell Line	embryonic stem cell
14	chr11:73498200-73500000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr11:73498200-73500000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr11:73498200-73500000	Active TSS	Skeletal Muscle Female	skeletal muscle
17	chr11:73498200-73500000	Active TSS	A549	lung
18	chr11:73498200-73500000	Active TSS	HMEC	breast
19	chr11:73498200-73500000	Active TSS	HSMMtube	muscle
20	chr11:73498200-73500200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr11:73498200-73500200	Active TSS	Colonic Mucosa	Colon
22	chr11:73498200-73500200	Active TSS	K562	blood
23	chr11:73498200-73500200	Active TSS	NHLF	lung
24	chr11:73498400-73499400	Active TSS	Placenta Amnion	Placenta Amnion
25	chr11:73498400-73499400	Active TSS	HepG2	liver
26	chr11:73498400-73499400	Active TSS	HUVEC	blood vessel
27	chr11:73498400-73499400	Active TSS	NHEK	skin
28	chr11:73498400-73499600	Active TSS	H9 Cell Line	embryonic stem cell
29	chr11:73498400-73499600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
30	chr11:73498400-73499600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr11:73498400-73499600	Active TSS	Fetal Kidney	kidney
32	chr11:73498400-73499600	Active TSS	Pancreas	Pancrea
33	chr11:73498400-73499600	Active TSS	Sigmoid Colon	Sigmoid Colon
34	chr11:73498400-73499600	Active TSS	Small Intestine	intestine
35	chr11:73498400-73499800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr11:73498400-73499800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr11:73498400-73499800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr11:73498400-73499800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr11:73498400-73499800	Active TSS	Duodenum Smooth Muscle	Duodenum
40	chr11:73498400-73499800	Active TSS	Esophagus	oesophagus
41	chr11:73498400-73499800	Active TSS	Left Ventricle	heart
42	chr11:73498400-73499800	Active TSS	Ovary	ovary
43	chr11:73498400-73499800	Active TSS	Right Atrium	heart
44	chr11:73498400-73500000	Active TSS	ES-I3 Cell Line	embryonic stem cell
45	chr11:73498400-73500000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
46	chr11:73498400-73500000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr11:73498400-73500000	Active TSS	HUES48 Cell Line	embryonic stem cell
48	chr11:73498400-73500000	Active TSS	HUES6 Cell Line	embryonic stem cell
49	chr11:73498400-73500000	Active TSS	HUES64 Cell Line	embryonic stem cell
50	chr11:73498400-73500000	Active TSS	iPS-15b Cell Line	embryonic stem cell

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