Variant report
| Variant | rs1797839 |
|---|---|
| Chromosome Location | chr3:119249871-119249872 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:119228000-119250000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr3:119231800-119257200 | Strong transcription | GM12878-XiMat | blood |
| 3 | chr3:119237800-119251400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr3:119237800-119255800 | Weak transcription | Spleen | Spleen |
| 5 | chr3:119239600-119253000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 6 | chr3:119239800-119252400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 7 | chr3:119243200-119251400 | Weak transcription | Brain Hippocampus Middle | brain |
| 8 | chr3:119243600-119250800 | Weak transcription | Brain Anterior Caudate | brain |
| 9 | chr3:119244200-119253400 | Weak transcription | Brain Substantia Nigra | brain |
| 10 | chr3:119244600-119253200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 11 | chr3:119244800-119253400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 12 | chr3:119244800-119257200 | Weak transcription | Primary B cells from cord blood | blood |
| 13 | chr3:119245200-119276600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 14 | chr3:119245400-119253400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 15 | chr3:119247400-119250800 | Weak transcription | Primary T cells from cord blood | blood |
| 16 | chr3:119249000-119254000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 17 | chr3:119249200-119251000 | Active TSS | Fetal Lung | lung |
