The 2.0 version of rSNPBase

Variant report

Variant rs4687860
Chromosome Location chr3:119194431-119194432
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119188400-119216200 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:119188400-119216800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:119188600-119198000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr3:119188600-119216200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:119188800-119196200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:119188800-119216200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr3:119189000-119196000 Weak transcription Small Intestine intestine
8 chr3:119189000-119196600 Weak transcription Rectal Smooth Muscle rectum
9 chr3:119189000-119196800 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr3:119189000-119197000 Weak transcription Muscle Satellite Cultured Cells --
11 chr3:119189000-119198000 Weak transcription HSMM muscle
12 chr3:119189000-119198200 Weak transcription NH-A brain
13 chr3:119189000-119199200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr3:119189000-119204400 Weak transcription NHDF-Ad bronchial
15 chr3:119189000-119216200 Weak transcription Stomach Mucosa stomach
16 chr3:119189000-119216200 Weak transcription HUVEC blood vessel
17 chr3:119189000-119216600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr3:119189200-119196000 Weak transcription Colon Smooth Muscle Colon
19 chr3:119189200-119199000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr3:119189200-119199600 Weak transcription HMEC breast
21 chr3:119189200-119203000 Weak transcription Fetal Kidney kidney
22 chr3:119189400-119201800 Strong transcription Fetal Stomach stomach
23 chr3:119189600-119205400 Weak transcription Hela-S3 cervix
24 chr3:119189600-119209200 Strong transcription Primary B cells from cord blood blood
25 chr3:119189600-119211800 Strong transcription Primary B cells from peripheral blood blood
26 chr3:119189600-119211800 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr3:119189800-119198800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr3:119189800-119199000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr3:119189800-119200800 Strong transcription Fetal Thymus thymus
30 chr3:119189800-119210000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr3:119189800-119211400 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr3:119189800-119212200 Strong transcription Primary monocytes fromperipheralblood blood
33 chr3:119189800-119216000 Weak transcription Fetal Heart heart
34 chr3:119190000-119195000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr3:119190000-119196000 Weak transcription Colonic Mucosa Colon
36 chr3:119190000-119201200 Strong transcription Primary T helper naive cells fromperipheralblood blood
37 chr3:119190000-119201800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:119190000-119202000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:119190000-119211800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr3:119190000-119212200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr3:119190000-119212200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr3:119190200-119200200 Strong transcription Primary T helper naive cells from peripheral blood blood
43 chr3:119190400-119199200 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr3:119190400-119212200 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr3:119190600-119196200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr3:119190600-119196200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr3:119190600-119196200 Weak transcription Brain Germinal Matrix brain
48 chr3:119190600-119199200 Strong transcription Duodenum Mucosa Duodenum
49 chr3:119190600-119204800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:119190600-119211800 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015