Variant report

Variant	rs1799018
Chromosome Location	chr7:78524444-78524445
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1207807	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1799002	1.00[ASN][1000 genomes]
rs477641	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs480203	1.00[ASN][1000 genomes]
rs518676	1.00[ASN][1000 genomes]
rs537574	0.94[CEU][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs561356	0.82[CEU][hapmap];1.00[ASN][1000 genomes]
rs562083	0.94[CEU][hapmap]
rs572104	0.87[CEU][hapmap]
rs73135572	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv464598	chr7:78492642-79483480	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv607659	chr7:78492642-79483480	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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