Variant report
| Variant | rs1805686 |
|---|---|
| Chromosome Location | chr12:9221707-9221708 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:9217400-9223400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 2 | chr12:9217600-9223200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 3 | chr12:9217800-9225000 | Weak transcription | Small Intestine | intestine |
| 4 | chr12:9217800-9234200 | Weak transcription | Primary T cells from cord blood | blood |
| 5 | chr12:9218000-9226800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 6 | chr12:9218000-9234000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 7 | chr12:9218200-9223000 | Weak transcription | Aorta | Aorta |
| 8 | chr12:9218200-9223200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 9 | chr12:9218200-9224200 | Weak transcription | Ovary | ovary |
| 10 | chr12:9218200-9232200 | Weak transcription | Fetal Muscle Leg | muscle |
| 11 | chr12:9218200-9236200 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr12:9218200-9266200 | Weak transcription | Fetal Kidney | kidney |
| 13 | chr12:9218400-9223800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 14 | chr12:9218400-9224200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 15 | chr12:9218400-9224200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 16 | chr12:9218400-9224600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr12:9218400-9228600 | Weak transcription | Brain Anterior Caudate | brain |
| 18 | chr12:9218400-9230800 | Weak transcription | Brain Hippocampus Middle | brain |
| 19 | chr12:9218400-9231000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 20 | chr12:9218400-9234400 | Weak transcription | Right Atrium | heart |
| 21 | chr12:9218400-9236600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr12:9218400-9236600 | Weak transcription | Brain Substantia Nigra | brain |
| 23 | chr12:9218400-9237200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr12:9218600-9225000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 25 | chr12:9218600-9229400 | Weak transcription | Colonic Mucosa | Colon |
| 26 | chr12:9218600-9235600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 27 | chr12:9218600-9235800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr12:9218600-9236400 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr12:9218800-9225000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 30 | chr12:9218800-9230400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 31 | chr12:9218800-9236200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 32 | chr12:9218800-9236200 | Weak transcription | Fetal Heart | heart |
| 33 | chr12:9219000-9223000 | Weak transcription | Spleen | Spleen |
| 34 | chr12:9219000-9224000 | Weak transcription | Colon Smooth Muscle | Colon |
| 35 | chr12:9219000-9233200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 36 | chr12:9219200-9223600 | Weak transcription | Fetal Stomach | stomach |
| 37 | chr12:9219200-9224200 | Weak transcription | Right Ventricle | heart |
| 38 | chr12:9219200-9225000 | Weak transcription | Lung | lung |
| 39 | chr12:9219200-9226400 | Weak transcription | Pancreas | Pancrea |
| 40 | chr12:9219200-9229200 | Weak transcription | Gastric | stomach |
| 41 | chr12:9219200-9234600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 42 | chr12:9219200-9266000 | Weak transcription | Esophagus | oesophagus |
| 43 | chr12:9219400-9233200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 44 | chr12:9219600-9224600 | Weak transcription | Fetal Intestine Large | intestine |
| 45 | chr12:9219800-9222200 | Strong transcription | Liver | Liver |
| 46 | chr12:9219800-9225200 | Strong transcription | Adipose Nuclei | Adipose |
| 47 | chr12:9219800-9233200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 48 | chr12:9219800-9235800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 49 | chr12:9220000-9224800 | Weak transcription | Fetal Intestine Small | intestine |
| 50 | chr12:9220200-9221800 | Strong transcription | Left Ventricle | heart |
