Variant report

Variant rs1805800
Chromosome Location chr8:90997339-90997340
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:90993800-90997600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr8:90994600-90997600 Active TSS Brain Substantia Nigra brain
3 chr8:90994800-90997400 Active TSS iPS-20b Cell Line embryonic stem cell
4 chr8:90994800-90997400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr8:90994800-90997400 Active TSS K562 blood
6 chr8:90995600-90997400 Active TSS Brain Hippocampus Middle brain
7 chr8:90996000-90997400 Active TSS HUES64 Cell Line embryonic stem cell
8 chr8:90996000-90997400 Active TSS Brain Angular Gyrus brain
9 chr8:90996000-90997400 Active TSS Spleen Spleen
10 chr8:90996200-90997400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
11 chr8:90996800-90997600 Enhancers Fetal Lung lung
12 chr8:90997000-90997400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr8:90997000-90997400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
14 chr8:90997000-90997400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr8:90997000-90997400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
16 chr8:90997000-90997400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr8:90997000-90997400 Flanking Active TSS Colon Smooth Muscle Colon
18 chr8:90997000-90997400 Flanking Active TSS Fetal Brain Female brain
19 chr8:90997000-90997400 Flanking Active TSS A549 lung
20 chr8:90997000-90997400 Flanking Active TSS Hela-S3 cervix
21 chr8:90997000-90997400 Flanking Active TSS HepG2 liver
22 chr8:90997000-90997400 Flanking Active TSS HSMMtube muscle
23 chr8:90997000-90997600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr8:90997000-90997600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr8:90997000-90997600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr8:90997000-90997600 Enhancers Rectal Smooth Muscle rectum
27 chr8:90997000-90997600 Flanking Active TSS Dnd41 blood
28 chr8:90997000-90997800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr8:90997000-90999400 Weak transcription HMEC breast
30 chr8:90997000-91004600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr8:90997200-90997400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr8:90997200-90997400 Enhancers Primary neutrophils fromperipheralblood blood
33 chr8:90997200-90997400 Flanking Active TSS Primary B cells from cord blood blood
34 chr8:90997200-90997400 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr8:90997200-90997400 Enhancers Primary T regulatory cells fromperipheralblood blood
36 chr8:90997200-90997400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr8:90997200-90997400 Enhancers Adipose Nuclei Adipose
38 chr8:90997200-90997400 Enhancers Brain Germinal Matrix brain
39 chr8:90997200-90997400 Enhancers Duodenum Smooth Muscle Duodenum
40 chr8:90997200-90997400 Enhancers Fetal Kidney kidney
41 chr8:90997200-90997400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
42 chr8:90997200-90997400 Enhancers Rectal Mucosa Donor 29 rectum
43 chr8:90997200-90997400 Enhancers Rectal Mucosa Donor 31 rectum
44 chr8:90997200-90997400 Enhancers Stomach Smooth Muscle stomach
45 chr8:90997200-90997400 Flanking Active TSS GM12878-XiMat blood
46 chr8:90997200-90997400 Enhancers HUVEC blood vessel
47 chr8:90997200-90997400 Enhancers Monocytes-CD14+_RO01746 blood
48 chr8:90997200-90997400 Enhancers Osteobl bone
49 chr8:90997200-90997600 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr8:90997200-90997600 Enhancers Primary B cells from peripheral blood blood

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