Variant report

Variant	rs180692961
Chromosome Location	chrX:78292079-78292080
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3394349	chrX:77977388-78779139	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases
2	esv3324722	chrX:78268856-78334943	Enhancers Weak transcription Active TSS	lncRNA	n/a	inside rSNPs	diseases
3	nsv510837	chrX:78290996-78357205	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:78289400-78292200	Enhancers	Primary T cells from cord blood	blood
2	chrX:78289400-78292600	Enhancers	Dnd41	blood
3	chrX:78289800-78292400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chrX:78290600-78292600	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chrX:78291400-78292200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
6	chrX:78291400-78292400	Enhancers	Primary T helper cells PMA-I stimulated	--
7	chrX:78291400-78292400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chrX:78291600-78292400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chrX:78291800-78292200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chrX:78291800-78292200	Enhancers	Primary B cells from cord blood	blood
11	chrX:78291800-78292200	Enhancers	Primary T cells fromperipheralblood	blood
12	chrX:78291800-78292400	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chrX:78292000-78292200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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