The 2.0 version of rSNPBase

Variant report

Variant rs1810344
Chromosome Location chr1:224318001-224318002
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224302800-224318200 Weak transcription Fetal Muscle Trunk muscle
2 chr1:224302800-224318200 Weak transcription Left Ventricle heart
3 chr1:224302800-224318200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:224302800-224318400 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:224302800-224319600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:224302800-224319600 Weak transcription Esophagus oesophagus
7 chr1:224302800-224319600 Weak transcription Lung lung
8 chr1:224302800-224319600 Weak transcription Small Intestine intestine
9 chr1:224302800-224320200 Weak transcription Pancreas Pancrea
10 chr1:224302800-224327200 Weak transcription Aorta Aorta
11 chr1:224303000-224318200 Weak transcription Colonic Mucosa Colon
12 chr1:224303000-224329000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:224303000-224363400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:224304000-224319600 Weak transcription Fetal Stomach stomach
15 chr1:224304200-224318200 Weak transcription Fetal Heart heart
16 chr1:224304400-224318200 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr1:224304400-224318200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:224304400-224318200 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:224304400-224318200 Weak transcription Rectal Smooth Muscle rectum
20 chr1:224304400-224318200 Weak transcription Stomach Smooth Muscle stomach
21 chr1:224304400-224320000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:224304600-224318200 Weak transcription Adipose Nuclei Adipose
23 chr1:224304600-224318800 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:224304800-224318400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:224307400-224318200 Weak transcription HSMM muscle
26 chr1:224308000-224318200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:224308200-224318200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr1:224308200-224318200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:224308200-224318400 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr1:224309600-224318200 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:224310400-224318200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr1:224310600-224318200 Weak transcription Brain Substantia Nigra brain
33 chr1:224310600-224318400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr1:224310600-224318400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:224310600-224319000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:224310800-224318200 Weak transcription Brain Anterior Caudate brain
37 chr1:224310800-224318200 Weak transcription Brain Cingulate Gyrus brain
38 chr1:224311000-224318200 Weak transcription Brain Hippocampus Middle brain
39 chr1:224311200-224318200 Weak transcription Brain Inferior Temporal Lobe brain
40 chr1:224311800-224319600 Weak transcription Gastric stomach
41 chr1:224312600-224318200 Weak transcription Colon Smooth Muscle Colon
42 chr1:224313000-224318200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:224313600-224318200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr1:224314000-224318200 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:224314000-224318200 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr1:224314400-224318200 Weak transcription Primary hematopoietic stem cells blood
47 chr1:224314400-224318800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:224314400-224333800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr1:224314400-224343400 Weak transcription Psoas Muscle Psoas
50 chr1:224315600-224319600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015