Variant report

Variant	rs1811260
Chromosome Location	chr12:4208602-4208603
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11831812	0.80[AFR][1000 genomes]
rs11838249	0.80[AFR][1000 genomes]
rs2532536	0.81[AMR][1000 genomes]
rs2532563	0.81[AMR][1000 genomes]
rs2540149	0.81[AMR][1000 genomes]
rs2724205	0.81[AMR][1000 genomes]
rs2724207	0.81[AMR][1000 genomes]
rs2724210	0.81[AMR][1000 genomes]
rs55772551	0.80[AFR][1000 genomes]
rs7314725	0.81[AMR][1000 genomes]
rs7315487	0.81[AMR][1000 genomes]
rs73259527	0.80[AFR][1000 genomes]
rs74058994	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530520	chr12:3726841-4601757	Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv976559	chr12:4206772-4216198	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:4208200-4211200	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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