Variant report

Variant rs1820189
Chromosome Location chr16:70097966-70097967
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:70045800-70098000 Weak transcription Hela-S3 cervix
2 chr16:70052600-70098000 Weak transcription NHEK skin
3 chr16:70056600-70098000 Weak transcription Colonic Mucosa Colon
4 chr16:70058400-70098200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr16:70069000-70098200 Weak transcription Small Intestine intestine
6 chr16:70069600-70098000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr16:70070400-70098200 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr16:70076200-70098000 Weak transcription Placenta Placenta
9 chr16:70076200-70098600 Weak transcription Aorta Aorta
10 chr16:70077000-70098400 Weak transcription Fetal Stomach stomach
11 chr16:70078600-70098600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr16:70083800-70098000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr16:70083800-70098200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr16:70087400-70098000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr16:70091200-70098600 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr16:70092600-70098000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr16:70092600-70098200 Weak transcription Primary B cells from peripheral blood blood
18 chr16:70094600-70098800 Weak transcription Right Atrium heart
19 chr16:70095000-70098200 Weak transcription Adipose Nuclei Adipose
20 chr16:70095800-70098600 Enhancers Liver Liver
21 chr16:70096000-70098000 Weak transcription Psoas Muscle Psoas
22 chr16:70096000-70098600 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr16:70096000-70098600 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr16:70096000-70098600 Weak transcription A549 lung
25 chr16:70096000-70098600 Weak transcription GM12878-XiMat blood
26 chr16:70096000-70098800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr16:70096000-70098800 Weak transcription Stomach Mucosa stomach
28 chr16:70096200-70098000 Weak transcription Brain Hippocampus Middle brain
29 chr16:70096200-70098000 Enhancers HepG2 liver
30 chr16:70096200-70098600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr16:70096200-70098600 Weak transcription Gastric stomach
32 chr16:70096200-70098600 Weak transcription K562 blood
33 chr16:70096400-70098000 Weak transcription Duodenum Mucosa Duodenum
34 chr16:70096400-70098000 Weak transcription Fetal Intestine Large intestine
35 chr16:70096400-70098600 Weak transcription H1 Cell Line embryonic stem cell
36 chr16:70096800-70098200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr16:70097000-70098600 Enhancers Pancreas Pancrea
38 chr16:70097400-70098000 Enhancers Rectal Mucosa Donor 29 rectum
39 chr16:70097400-70098200 Enhancers Rectal Mucosa Donor 31 rectum
40 chr16:70097400-70098400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr16:70097400-70098600 Enhancers Left Ventricle heart
42 chr16:70097400-70101200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr16:70097600-70098000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr16:70097600-70099000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr16:70097600-70101200 Active TSS Pancreatic Islets Pancreatic Islet
46 chr16:70097800-70098400 Weak transcription Muscle Satellite Cultured Cells --
47 chr16:70097800-70098600 Enhancers Colon Smooth Muscle Colon
48 chr16:70097800-70101000 Active TSS Fetal Intestine Small intestine

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