Variant report

Variant	rs182043541
Chromosome Location	chr7:13932252-13932253
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:13894294..13896373-chr7:13930641..13933578,2	K562	blood:
2	chr7:13931063..13934018-chr7:13935773..13937430,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019873	chr7:13707148-14133367	Bivalent Enhancer Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1020310	chr7:13839681-14015794	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv538738	chr7:13839681-14015794	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv887698	chr7:13841798-14056075	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv1020543	chr7:13851470-14021121	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv606277	chr7:13907827-13967377	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
7	nsv970448	chr7:13930931-13932709	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv606278	chr7:13931182-13959406	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:13920600-13943000	Weak transcription	NHDF-Ad	bronchial
2	chr7:13920600-13945600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr7:13920800-13943600	Weak transcription	NHLF	lung
4	chr7:13921400-13943400	Weak transcription	Osteobl	bone
5	chr7:13921600-13933800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:13921800-13935000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr7:13921800-13936000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr7:13926000-13934600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr7:13928400-13933000	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr7:13928400-13943600	Weak transcription	NH-A	brain
11	chr7:13930200-13945200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr7:13930400-13945200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr7:13930600-13934600	Weak transcription	Left Ventricle	heart
14	chr7:13930600-13937200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr7:13930600-13937200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr7:13930600-13948200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr7:13930800-13935400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr7:13930800-13951800	Weak transcription	Fetal Kidney	kidney
19	chr7:13930800-13971000	Weak transcription	H9 Cell Line	embryonic stem cell
20	chr7:13931000-13947800	Weak transcription	Right Ventricle	heart
21	chr7:13932000-13952800	Weak transcription	Adipose Nuclei	Adipose
22	chr7:13932200-13932400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr7:13932200-13932600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
24	chr7:13932200-13932600	ZNF genes & repeats	Fetal Lung	lung
25	chr7:13932200-13932800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
26	chr7:13932200-13938200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr7:13932200-13949600	Strong transcription	Cortex derived primary cultured neurospheres	brain
28	chr7:13932200-13949600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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