Variant report
| Variant | rs1822741 |
|---|---|
| Chromosome Location | chr12:46613097-46613098 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46590800-46613200 | Strong transcription | Hela-S3 | cervix |
| 2 | chr12:46591000-46613200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 3 | chr12:46591000-46613600 | Weak transcription | Fetal Brain Male | brain |
| 4 | chr12:46591000-46613600 | Weak transcription | Gastric | stomach |
| 5 | chr12:46592400-46613400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 6 | chr12:46592800-46654200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 7 | chr12:46596000-46618200 | Weak transcription | Aorta | Aorta |
| 8 | chr12:46597400-46614200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 9 | chr12:46597600-46659600 | Weak transcription | Colonic Mucosa | Colon |
| 10 | chr12:46600000-46613600 | Weak transcription | NHLF | lung |
| 11 | chr12:46601200-46613200 | Weak transcription | NH-A | brain |
| 12 | chr12:46601400-46613200 | Weak transcription | Fetal Brain Female | brain |
| 13 | chr12:46604000-46613400 | Weak transcription | Brain Angular Gyrus | brain |
| 14 | chr12:46604000-46623400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 15 | chr12:46604000-46633800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr12:46604000-46637400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr12:46604200-46613600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr12:46604400-46613400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr12:46604400-46618600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 20 | chr12:46605000-46615000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 21 | chr12:46605000-46615200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 22 | chr12:46605200-46613200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 23 | chr12:46605400-46613400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr12:46606400-46613400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 25 | chr12:46606600-46613200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 26 | chr12:46607000-46615000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 27 | chr12:46607400-46613400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 28 | chr12:46607400-46613400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 29 | chr12:46607600-46613200 | Weak transcription | Fetal Intestine Large | intestine |
| 30 | chr12:46607800-46613200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 31 | chr12:46607800-46613400 | Weak transcription | A549 | lung |
| 32 | chr12:46608400-46615000 | Enhancers | Primary hematopoietic stem cells | blood |
| 33 | chr12:46608400-46618200 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 34 | chr12:46609000-46614400 | Weak transcription | Fetal Stomach | stomach |
| 35 | chr12:46609200-46613200 | Weak transcription | Colon Smooth Muscle | Colon |
| 36 | chr12:46609200-46613200 | Weak transcription | Fetal Heart | heart |
| 37 | chr12:46609200-46613400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 38 | chr12:46609200-46613600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 39 | chr12:46609200-46613600 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr12:46609200-46618600 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 41 | chr12:46609600-46613400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 42 | chr12:46610000-46613400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr12:46610000-46613400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 44 | chr12:46610200-46613800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 45 | chr12:46610200-46619000 | Weak transcription | Psoas Muscle | Psoas |
| 46 | chr12:46610400-46613400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 47 | chr12:46610400-46613400 | Weak transcription | Adipose Nuclei | Adipose |
| 48 | chr12:46610400-46613600 | Weak transcription | Spleen | Spleen |
| 49 | chr12:46610400-46624000 | Weak transcription | Pancreas | Pancrea |
| 50 | chr12:46610600-46613200 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
