Variant report

Variant rs183201515
Chromosome Location chr5:180262076-180262077
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259000-180264400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:180259000-180272600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:180259400-180262200 Weak transcription HSMMtube muscle
4 chr5:180259400-180263600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr5:180259400-180271400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:180259600-180264600 Weak transcription HMEC breast
8 chr5:180259600-180272400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr5:180259600-180272600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr5:180260000-180264000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr5:180260000-180268800 Weak transcription Brain Germinal Matrix brain
13 chr5:180260000-180271400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr5:180260000-180273200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
16 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --
17 chr5:180260000-180274400 Weak transcription NHDF-Ad bronchial
18 chr5:180260000-180276200 Weak transcription Stomach Mucosa stomach
19 chr5:180260200-180262200 Weak transcription Right Atrium heart
20 chr5:180260200-180263600 Weak transcription HepG2 liver
21 chr5:180260200-180264200 Weak transcription K562 blood
22 chr5:180260200-180267400 Weak transcription Fetal Heart heart
23 chr5:180260400-180263000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
24 chr5:180260600-180262600 Weak transcription Fetal Brain Male brain
25 chr5:180260800-180262400 Genic enhancers Adipose Nuclei Adipose
26 chr5:180261000-180262200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:180261000-180262400 Genic enhancers Primary B cells from peripheral blood blood
28 chr5:180261000-180262400 Genic enhancers Primary T cells fromperipheralblood blood
29 chr5:180261000-180264400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:180261000-180264800 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr5:180261000-180265000 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr5:180261000-180265400 Strong transcription Primary monocytes fromperipheralblood blood
33 chr5:180261000-180265400 Strong transcription Primary B cells from cord blood blood
34 chr5:180261000-180265400 Strong transcription Fetal Muscle Trunk muscle
35 chr5:180261000-180265400 Strong transcription Left Ventricle heart
36 chr5:180261000-180265400 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr5:180261200-180262200 Genic enhancers Primary T helper naive cells from peripheral blood blood
38 chr5:180261200-180262400 Genic enhancers Brain Substantia Nigra brain
39 chr5:180261200-180262600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
40 chr5:180261200-180264000 Strong transcription Fetal Muscle Leg muscle
41 chr5:180261200-180264600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr5:180261200-180264600 Strong transcription Primary hematopoietic stem cells blood
43 chr5:180261200-180265000 Strong transcription Duodenum Mucosa Duodenum
44 chr5:180261200-180265200 Strong transcription Brain Anterior Caudate brain
45 chr5:180261200-180265200 Strong transcription Brain Inferior Temporal Lobe brain
46 chr5:180261200-180265200 Strong transcription Placenta Placenta
47 chr5:180261200-180265400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr5:180261200-180265400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr5:180261200-180265400 Strong transcription Liver Liver
50 chr5:180261200-180265600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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