Variant report

Variant rs183465494
Chromosome Location chr5:180262814-180262815
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259000-180264400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:180259000-180272600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:180259400-180263600 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr5:180259400-180271400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:180259600-180264600 Weak transcription HMEC breast
7 chr5:180259600-180272400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr5:180259600-180272600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr5:180260000-180264000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr5:180260000-180268800 Weak transcription Brain Germinal Matrix brain
12 chr5:180260000-180271400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr5:180260000-180273200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
15 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --
16 chr5:180260000-180274400 Weak transcription NHDF-Ad bronchial
17 chr5:180260000-180276200 Weak transcription Stomach Mucosa stomach
18 chr5:180260200-180263600 Weak transcription HepG2 liver
19 chr5:180260200-180264200 Weak transcription K562 blood
20 chr5:180260200-180267400 Weak transcription Fetal Heart heart
21 chr5:180260400-180263000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
22 chr5:180261000-180264400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr5:180261000-180264800 Strong transcription Rectal Mucosa Donor 29 rectum
24 chr5:180261000-180265000 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr5:180261000-180265400 Strong transcription Primary monocytes fromperipheralblood blood
26 chr5:180261000-180265400 Strong transcription Primary B cells from cord blood blood
27 chr5:180261000-180265400 Strong transcription Fetal Muscle Trunk muscle
28 chr5:180261000-180265400 Strong transcription Left Ventricle heart
29 chr5:180261000-180265400 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr5:180261200-180264000 Strong transcription Fetal Muscle Leg muscle
31 chr5:180261200-180264600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr5:180261200-180264600 Strong transcription Primary hematopoietic stem cells blood
33 chr5:180261200-180265000 Strong transcription Duodenum Mucosa Duodenum
34 chr5:180261200-180265200 Strong transcription Brain Anterior Caudate brain
35 chr5:180261200-180265200 Strong transcription Brain Inferior Temporal Lobe brain
36 chr5:180261200-180265200 Strong transcription Placenta Placenta
37 chr5:180261200-180265400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr5:180261200-180265400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr5:180261200-180265400 Strong transcription Liver Liver
40 chr5:180261200-180265600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr5:180261200-180265600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr5:180261400-180263200 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr5:180261400-180263800 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr5:180261400-180264000 Strong transcription Colonic Mucosa Colon
45 chr5:180261400-180264200 Strong transcription Lung lung
46 chr5:180261400-180264400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr5:180261400-180264600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr5:180261400-180264600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr5:180261400-180264600 Strong transcription Aorta Aorta
50 chr5:180261400-180264600 Strong transcription Skeletal Muscle Male skeletal muscle

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