The 2.0 version of rSNPBase

Variant report

Variant rs1836203
Chromosome Location chr2:179217482-179217483
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179183800-179247800 Weak transcription Psoas Muscle Psoas
2 chr2:179194600-179229400 Weak transcription K562 blood
3 chr2:179195400-179229000 Weak transcription Brain Substantia Nigra brain
4 chr2:179198400-179227400 Weak transcription NHEK skin
5 chr2:179199000-179241200 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr2:179199600-179240400 Weak transcription Fetal Stomach stomach
7 chr2:179201600-179218400 Weak transcription Fetal Muscle Leg muscle
8 chr2:179201800-179240000 Weak transcription Stomach Smooth Muscle stomach
9 chr2:179201800-179240400 Weak transcription Fetal Muscle Trunk muscle
10 chr2:179201800-179240400 Weak transcription HSMMtube muscle
11 chr2:179201800-179253600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr2:179201800-179268200 Weak transcription HSMM muscle
13 chr2:179202400-179227400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:179202400-179230600 Weak transcription Fetal Brain Male brain
15 chr2:179202400-179248000 Weak transcription NH-A brain
16 chr2:179206800-179218600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:179209000-179220800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:179209200-179253000 Weak transcription Esophagus oesophagus
19 chr2:179209600-179227200 Weak transcription HMEC breast
20 chr2:179210800-179257200 Weak transcription Pancreas Pancrea
21 chr2:179213200-179229400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:179213800-179217600 Strong transcription Skeletal Muscle Female skeletal muscle
23 chr2:179214600-179218200 Strong transcription Brain Inferior Temporal Lobe brain
24 chr2:179214800-179220200 Weak transcription Brain Angular Gyrus brain
25 chr2:179215000-179218200 Weak transcription Fetal Brain Female brain
26 chr2:179215000-179218800 Weak transcription Left Ventricle heart
27 chr2:179215200-179218600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr2:179215200-179248800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr2:179215600-179239800 Weak transcription Brain Anterior Caudate brain
30 chr2:179216200-179220200 Weak transcription Brain Germinal Matrix brain
31 chr2:179216400-179217800 Strong transcription Skeletal Muscle Male skeletal muscle
32 chr2:179216400-179218200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:179216600-179226200 Weak transcription Liver Liver
34 chr2:179216800-179217600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr2:179216800-179217600 Active TSS HepG2 liver
36 chr2:179217000-179217600 Enhancers HUES6 Cell Line embryonic stem cell
37 chr2:179217000-179223600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:179217400-179218600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
39 chr2:179217400-179240400 Weak transcription Aorta Aorta
40 chr2:179217400-179248400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015