The 2.0 version of rSNPBase

Variant report

Variant rs12464536
Chromosome Location chr2:179200386-179200387
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179164600-179200800 Weak transcription Aorta Aorta
2 chr2:179183800-179247800 Weak transcription Psoas Muscle Psoas
3 chr2:179189200-179201200 Weak transcription Ovary ovary
4 chr2:179189400-179201200 Weak transcription Fetal Brain Male brain
5 chr2:179189800-179217000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr2:179192600-179200600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:179193000-179201400 Weak transcription NH-A brain
8 chr2:179193000-179201800 Weak transcription Fetal Kidney kidney
9 chr2:179193000-179214600 Weak transcription Fetal Intestine Large intestine
10 chr2:179193200-179201000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr2:179193200-179201400 Weak transcription Fetal Brain Female brain
12 chr2:179193200-179210400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:179193200-179216200 Weak transcription Adipose Nuclei Adipose
14 chr2:179193400-179203400 Weak transcription Fetal Intestine Small intestine
15 chr2:179193400-179204800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr2:179193400-179215000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:179194600-179229400 Weak transcription K562 blood
18 chr2:179195400-179214600 Weak transcription Left Ventricle heart
19 chr2:179195400-179229000 Weak transcription Brain Substantia Nigra brain
20 chr2:179195600-179214200 Weak transcription Brain Hippocampus Middle brain
21 chr2:179195600-179214800 Weak transcription Brain Cingulate Gyrus brain
22 chr2:179196000-179201000 Weak transcription Brain Anterior Caudate brain
23 chr2:179196200-179207000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:179196400-179201200 Weak transcription Brain Germinal Matrix brain
25 chr2:179196600-179201000 Weak transcription Brain Angular Gyrus brain
26 chr2:179196600-179204600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:179196600-179213600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr2:179197000-179200800 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr2:179197000-179201000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr2:179197000-179201000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr2:179197000-179209000 Weak transcription Esophagus oesophagus
32 chr2:179197200-179201000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:179197200-179201000 Weak transcription Gastric stomach
34 chr2:179197800-179200600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:179197800-179201200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr2:179197800-179204200 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:179198400-179227400 Weak transcription NHEK skin
38 chr2:179199000-179200600 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr2:179199000-179201000 Weak transcription Fetal Muscle Leg muscle
40 chr2:179199000-179201400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr2:179199000-179241200 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr2:179199200-179200600 Weak transcription Liver Liver
43 chr2:179199200-179200600 Weak transcription HSMM muscle
44 chr2:179199200-179201600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr2:179199200-179207400 Weak transcription Pancreas Pancrea
46 chr2:179199200-179214400 Weak transcription Lung lung
47 chr2:179199200-179214600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr2:179199400-179201000 Weak transcription Right Ventricle heart
49 chr2:179199600-179201000 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr2:179199600-179201200 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015